ecearth3/runtime/classic/platform/fmi-voima.cfg.tmpl

#!/bin/sh

function configure()
{
    # This function should configure all settings/modules needed to
    # later prepare the EC-Earth run directory and set variables used
    # in the run script

    # Configure paths for building/running EC-Earth
    export ecearth_src_dir=[[[PLT:ACTIVE:ECEARTH_SRC_DIR]]]
    export run_dir=[[[PLT:ACTIVE:RUN_DIR]]]
    export ini_data_dir=[[[PLT:ACTIVE:INI_DATA_DIR]]]

    if [ ! -d $ecearth_src_dir ]; then
	echo "ECEARTH_SRC_DIR in config_run.xml is not a directory!"
	exit 1
    fi
    if [ ! -d $ini_data_dir ]; then
	echo "INI_DATA_DIR in config_run.xml is not a directory!"
	exit 1
    fi

    # File for standard output.
    # NOTE: This will be modified for restart jobs!
    stdout_file=${PBS_O_WORKDIR}/out/${PBS_JOBNAME}.out

    # Resubmit this job for automatic restarts? [true/false]
    # Also, add options for the resubmit command here.
    resubmit_job=[[[PLT:ACTIVE:RESUBMIT_JOB]]]
    resubmit_opt="[[[PLT:ACTIVE:RESUBMIT_OPT]]]"

    # Configure GRIBEX paths
    export LOCAL_DEFINITION_TEMPLATES=[[[PLT:ACTIVE:GRIBEX_DEFINITION_PATH]]]

    # Configure GRIB API paths
    export GRIB_DEFINITION_PATH=[[[PLT:ACTIVE:ECEARTH_SRC_DIR]]]/util/grib_table_126:[[[PLT:ACTIVE:GRIBAPI_BASE_DIR]]]/[[[PLT:ACTIVE:GRIBAPI_DEFINITION_SUBDIR]]]
    export GRIB_SAMPLES_PATH=[[[PLT:ACTIVE:GRIBAPI_BASE_DIR]]]/[[[PLT:ACTIVE:GRIBAPI_SAMPLES_SUBDIR]]]
    export GRIB_BIN_PATH=[[[PLT:ACTIVE:GRIBAPI_BASE_DIR]]]/[[[PLT:ACTIVE:GRIBAPI_BIN_SUBDIR]]]

    # Configure number of processors per node
    proc_per_node=[[[PLT:ACTIVE:PROC_PER_NODE]]]

    # Configure and load modules
    pre_load_modules_cmd="[[[PLT:ACTIVE:PRE_LOAD_MODULES_CMD]]]"
    module_list="[[[PLT:ACTIVE:MODULE_LIST]]]"

    if [ -n "${module_list}" ]
    then
        set +u
        if [ -n "${pre_load_modules_cmd}" ]
        then
            ${pre_load_modules_cmd}
        fi
        for m in "${module_list}"
        do
            module add ${m}
        done
        set -u
    fi

    # Add directories to the shared library search path
    if [ -n "[[[PLT:ACTIVE:ADD_TO_LD_LIBRARY_PATH]]]" ]
    then
        export LD_LIBRARY_PATH=${LD_LIBRARY_PATH:+${LD_LIBRARY_PATH}:}"[[[PLT:ACTIVE:ADD_TO_LD_LIBRARY_PATH]]]"
    fi

    ulimit -s unlimited
}

function launch()
{
    # This function should launch the execution of a coupled experiment and handle
    # any configuration that for some reason couldnt go into the configuration
    # function

    cmd="aprun "

    while (( "$#" ))
      do
	nranks=$1
	executable=./$(basename $2)
	shift
	shift

	if [ $nranks -le $proc_per_node ]; then
	    cmd+=" -n $nranks $executable "
	else
	    cmd+=" -n $nranks -N $proc_per_node $executable "
	fi

        while (( "$#" )) && [ "$1" != "--" ]
        do
            cmd+=" $1"
            shift
        done
        shift || true

        (( "$#" )) && cmd+=" :"
    done

    echo $cmd

    $cmd
}


function finalise()
{
    # This function should execute of any post run functionality, e.g.
    # platform dependent cleaning or a resubmit

    if ${resubmit_job} && [ $(date -d "${leg_end_date}" +%s) -lt $(date -d "${run_end_date}" +%s) ]
    then
        info "Resubmitting job for leg $((leg_number+1))"
        # Submit command
        cd ${PBS_O_WORKDIR}
        echo qsub -W depend=afterany:${PBS_JOBID} ${exp_name}.sh
        qsub -W depend=afterany:${PBS_JOBID} ${exp_name}.sh
        #qsub -j oe -m n                                                                      \
        #     -o ${run_dir}/$(basename ${stdout_file}).$(printf %03d $((leg_number+1)))       \
        #     ${resubmit_opt}                                                                 \
        #     -l mppwidth=$(qstat -f ${PBS_JOBID} | awk '/Resource_List.mppwidth/{print $3}') \
        #     -W depend=afterok:${PBS_JOBID}                                                  \
        #     ./${exp_name}.sh
    fi
}