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- MODULE iom
- !!=====================================================================
- !! *** MODULE iom ***
- !! Input/Output manager : Library to read input files
- !!====================================================================
- !! History : 2.0 ! 2005-12 (J. Belier) Original code
- !! 2.0 ! 2006-02 (S. Masson) Adaptation to NEMO
- !! 3.0 ! 2007-07 (D. Storkey) Changes to iom_gettime
- !! 3.4 ! 2012-12 (R. Bourdalle-Badie and G. Reffray) add C1D case
- !!--------------------------------------------------------------------
- !!--------------------------------------------------------------------
- !! iom_open : open a file read only
- !! iom_close : close a file or all files opened by iom
- !! iom_get : read a field (interfaced to several routines)
- !! iom_gettime : read the time axis cdvar in the file
- !! iom_varid : get the id of a variable in a file
- !! iom_rstput : write a field in a restart file (interfaced to several routines)
- !!--------------------------------------------------------------------
- USE dom_oce ! ocean space and time domain
- USE c1d ! 1D vertical configuration
- USE flo_oce ! floats module declarations
- USE lbclnk ! lateal boundary condition / mpp exchanges
- USE iom_def ! iom variables definitions
- USE iom_ioipsl ! NetCDF format with IOIPSL library
- USE iom_nf90 ! NetCDF format with native NetCDF library
- USE iom_rstdimg ! restarts access direct format "dimg" style...
- USE in_out_manager ! I/O manager
- USE lib_mpp ! MPP library
- #if defined key_iomput
- USE sbc_oce, ONLY : nn_fsbc ! ocean space and time domain
- USE trc_oce, ONLY : nn_dttrc ! !: frequency of step on passive tracers
- USE icb_oce, ONLY : nclasses, class_num ! !: iceberg classes
- #if defined key_lim3
- USE ice , ONLY : jpl
- #elif defined key_lim2
- USE par_ice_2
- #endif
- USE domngb ! ocean space and time domain
- USE phycst ! physical constants
- USE dianam ! build name of file
- USE xios
- # endif
- USE ioipsl, ONLY : ju2ymds ! for calendar
- USE crs ! Grid coarsening
- USE dom_xios
- IMPLICIT NONE
- PUBLIC ! must be public to be able to access iom_def through iom
-
- #if defined key_iomput
- LOGICAL, PUBLIC, PARAMETER :: lk_iomput = .TRUE. !: iom_put flag
- #else
- LOGICAL, PUBLIC, PARAMETER :: lk_iomput = .FALSE. !: iom_put flag
- #endif
- PUBLIC iom_init, iom_swap, iom_open, iom_close, iom_setkt, iom_varid, iom_get, iom_gettime, iom_rstput, iom_put
- PUBLIC iom_getatt, iom_use, iom_context_finalize, iom_miss_val
- #if defined key_iomput
- PUBLIC dom_xios_read_coordinates
- PRIVATE dom_xios_create_coordinates, dom_xios_write_coordinates
- #endif
- PRIVATE iom_rp0d, iom_rp1d, iom_rp2d, iom_rp3d
- PRIVATE iom_g0d, iom_g1d, iom_g2d, iom_g3d, iom_get_123d
- PRIVATE iom_p1d, iom_p2d, iom_p3d, iom_p4d
- #if defined key_iomput
- PRIVATE iom_set_domain_attr, iom_set_axis_attr, iom_set_field_attr, iom_set_file_attr, iom_get_file_attr, iom_set_grid_attr
- PRIVATE set_grid, set_grid_bounds, set_scalar, set_xmlatt, set_mooring, iom_update_file_name, iom_sdate
- PRIVATE set_grid_xios, set_grid_znl, set_grid_xios_znl
- # endif
- INTERFACE iom_get
- MODULE PROCEDURE iom_g0d, iom_g1d, iom_g2d, iom_g3d
- END INTERFACE
- INTERFACE iom_getatt
- MODULE PROCEDURE iom_g0d_intatt
- END INTERFACE
- INTERFACE iom_rstput
- MODULE PROCEDURE iom_rp0d, iom_rp1d, iom_rp2d, iom_rp3d
- END INTERFACE
- INTERFACE iom_put
- MODULE PROCEDURE iom_p0d, iom_p1d, iom_p2d, iom_p3d, iom_p4d
- END INTERFACE
- LOGICAL, SAVE :: ll_noland
- !!----------------------------------------------------------------------
- !! NEMO/OPA 3.3 , NEMO Consortium (2010)
- !! $Id: iom.F90 6315 2016-02-15 12:24:20Z cetlod $
- !! Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt)
- !!----------------------------------------------------------------------
-
- CONTAINS
- SUBROUTINE iom_init( cdname )
- !!----------------------------------------------------------------------
- !! *** ROUTINE ***
- !!
- !! ** Purpose :
- !!
- !!----------------------------------------------------------------------
- CHARACTER(len=*), INTENT(in) :: cdname
- #if defined key_iomput
- #if ! defined key_xios2
- TYPE(xios_time) :: dtime = xios_time(0, 0, 0, 0, 0, 0)
- CHARACTER(len=19) :: cldate
- #else
- TYPE(xios_duration) :: dtime = xios_duration(0, 0, 0, 0, 0, 0)
- TYPE(xios_date) :: start_date
- #endif
- CHARACTER(len=10) :: clname
- INTEGER :: irefyear
- !
- REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: z_bnds
- REAL(wp), DIMENSION(jpi,jpj,jpk) :: zmask
- REAL(wp), DIMENSION(jpi,jpj) :: zmaskutil
- LOGICAL, ALLOCATABLE, DIMENSION(:,:,:) :: zmask_xios
- INTEGER :: ib,ie,jb,je
- INTEGER :: ji,jj,jk,ikt
-
- !!----------------------------------------------------------------------
- ll_noland = jpni*jpnj /= jpnij
- #if ! defined key_xios2
- ALLOCATE( z_bnds(jpk,2) )
- #else
- ALLOCATE( z_bnds(2,jpk) )
- #endif
- clname = cdname
- IF( TRIM(Agrif_CFixed()) /= '0' ) clname = TRIM(Agrif_CFixed())//"_"//TRIM(cdname)
- CALL xios_context_initialize(TRIM(clname), mpi_comm_opa)
- CALL iom_swap( cdname )
- ! calendar parameters
- #if ! defined key_xios2
- SELECT CASE ( nleapy ) ! Choose calendar for IOIPSL
- CASE ( 1) ; CALL xios_set_context_attr(TRIM(clname), calendar_type= "Gregorian")
- CASE ( 0) ; CALL xios_set_context_attr(TRIM(clname), calendar_type= "NoLeap")
- CASE (30) ; CALL xios_set_context_attr(TRIM(clname), calendar_type= "D360")
- END SELECT
- WRITE(cldate,"(i4.4,'-',i2.2,'-',i2.2,' 00:00:00')") nyear,nmonth,nday
- CALL xios_set_context_attr(TRIM(clname), start_date=cldate )
- #else
- ! Calendar type is now defined in xml file
- IF (.NOT.(xios_getvar('ref_year',irefyear))) irefyear = 1900
- SELECT CASE ( nleapy ) ! Choose calendar for IOIPSL
- CASE ( 1) ; CALL xios_define_calendar( TYPE = "Gregorian", time_origin = xios_date(irefyear,01,01,00,00,00), &
- & start_date = xios_date(nyear,nmonth,nday,0,0,0) )
- CASE ( 0) ; CALL xios_define_calendar( TYPE = "NoLeap" , time_origin = xios_date(irefyear,01,01,00,00,00), &
- & start_date = xios_date(nyear,nmonth,nday,0,0,0) )
- CASE (30) ; CALL xios_define_calendar( TYPE = "D360" , time_origin = xios_date(irefyear,01,01,00,00,00), &
- & start_date = xios_date(nyear,nmonth,nday,0,0,0) )
- END SELECT
- #endif
- ! horizontal grid definition
- CALL set_scalar
- IF( TRIM(cdname) == TRIM(cxios_context) ) THEN
-
- IF( ll_noland .AND. using_xios_coordinates ) THEN
- ALLOCATE(zmask_xios(n_ni,n_nj,jpk))
- !
- ib=nimpp+nldi-n_ibegin
- ie=nimpp+nlei-n_ibegin
- jb=njmpp+nldj-n_jbegin
- je=njmpp+nlej-n_jbegin
-
- zmask_xios=.FALSE.
- zmask(:,:,:) = tmask(:,:,:)
- IF( ln_mskutil ) CALL dom_msk_util( zmask, 'T' )
- zmask_xios(ib:ie,jb:je,:) = zmask(nldi:nlei,nldj:nlej,:)/=0.
- CALL set_grid_xios("grid_T",lon_grid_T, lat_grid_T, bounds_lon_grid_T, bounds_lat_grid_T, area_grid_T, zmask_xios)
- CALL set_grid_xios_znl( lat_grid_T )
-
- zmask_xios=.FALSE.
- zmask(:,:,2:jpk ) = tmask(:,:,1:jpkm1) + tmask(:,:,2:jpk) ; zmask(:,:,1) = tmask(:,:,1)
- IF( ln_mskutil ) CALL dom_msk_util( zmask, 'W' )
- zmask_xios(ib:ie,jb:je,:) = zmask(nldi:nlei,nldj:nlej,:)/=0.
- CALL set_grid_xios("grid_W",lon_grid_W, lat_grid_W, bounds_lon_grid_W, bounds_lat_grid_W, area_grid_W, zmask_xios)
-
- zmask_xios=.FALSE.
- zmask(2:jpim1,:,:) = tmask(2:jpim1,:,:) + tmask(3:jpi,:,:) ; CALL lbc_lnk( zmask, 'U', 1. )
- IF( ln_mskutil ) CALL dom_msk_util( zmask, 'U' )
- zmask_xios(ib:ie,jb:je,:) = zmask(nldi:nlei,nldj:nlej,:)/=0.
- CALL set_grid_xios("grid_U",lon_grid_U, lat_grid_U, bounds_lon_grid_U, bounds_lat_grid_U, area_grid_U, zmask_xios)
-
- zmask_xios=.FALSE.
- zmask(:,2:jpjm1,:) = tmask(:,2:jpjm1,:) + tmask(:,3:jpj,:) ; CALL lbc_lnk( zmask, 'V', 1. )
- IF( ln_mskutil ) CALL dom_msk_util( zmask, 'V' )
- zmask_xios(ib:ie,jb:je,:) = zmask(nldi:nlei,nldj:nlej,:)/=0.
- CALL set_grid_xios("grid_V",lon_grid_V, lat_grid_V, bounds_lon_grid_V, bounds_lat_grid_V, area_grid_V, zmask_xios)
-
- ELSE
- !
- zmask(:,:,:) = tmask(:,:,:)
- IF( ln_mskutil ) CALL dom_msk_util( zmask, 'T' )
- CALL set_grid( "T", glamt, gphit, zmask )
-
- zmask(:,:,2:jpk ) = tmask(:,:,1:jpkm1) + tmask(:,:,2:jpk) ; zmask(:,:,1) = tmask(:,:,1)
- IF( ln_mskutil ) CALL dom_msk_util( zmask, 'W' )
- CALL set_grid( "W", glamt, gphit, zmask )
- zmask(2:jpim1,:,:) = tmask(2:jpim1,:,:) + tmask(3:jpi,:,:) ; CALL lbc_lnk( zmask, 'U', 1. )
- IF( ln_mskutil ) CALL dom_msk_util( zmask, 'U' )
- CALL set_grid( "U", glamu, gphiu, zmask )
- zmask(:,2:jpjm1,:) = tmask(:,2:jpjm1,:) + tmask(:,3:jpj,:) ; CALL lbc_lnk( zmask, 'V', 1. )
- IF( ln_mskutil ) CALL dom_msk_util( zmask, 'V' )
- CALL set_grid( "V", glamv, gphiv, zmask )
- !
- CALL set_grid_znl( gphit )
- !
- IF( ln_cfmeta ) THEN ! Add additional grid metadata
- CALL iom_set_domain_attr("grid_T", area = e12t(nldi:nlei, nldj:nlej))
- CALL iom_set_domain_attr("grid_U", area = e12u(nldi:nlei, nldj:nlej))
- CALL iom_set_domain_attr("grid_V", area = e12v(nldi:nlei, nldj:nlej))
- CALL iom_set_domain_attr("grid_W", area = e12t(nldi:nlei, nldj:nlej))
- CALL set_grid_bounds( "T", glamf, gphif, glamt, gphit )
- CALL set_grid_bounds( "U", glamv, gphiv, glamu, gphiu )
- CALL set_grid_bounds( "V", glamu, gphiu, glamv, gphiv )
- CALL set_grid_bounds( "W", glamf, gphif, glamt, gphit )
- ENDIF
-
- ENDIF
-
- ENDIF
- IF( TRIM(cdname) == TRIM(cxios_context)//"_crs" ) THEN
- CALL dom_grid_crs ! Save the parent grid information & Switch to coarse grid domain
- !
- zmask(:,:,:) = tmask(:,:,:)
- CALL set_grid( "T", glamt_crs, gphit_crs, zmask )
- !
- zmask(2:jpim1,:,:) = tmask(2:jpim1,:,:) + tmask(3:jpi,:,:) ; CALL lbc_lnk( zmask, 'U', 1. )
- CALL set_grid( "U", glamu_crs, gphiu_crs, zmask )
- !
- zmask(:,2:jpjm1,:) = tmask(:,2:jpjm1,:) + tmask(:,3:jpj,:) ; CALL lbc_lnk( zmask, 'V', 1. )
- CALL set_grid( "V", glamv_crs, gphiv_crs, zmask )
- !
- zmask(:,:,2:jpk ) = tmask(:,:,1:jpkm1) + tmask(:,:,2:jpk) ; zmask(:,:,1) = tmask(:,:,1)
- CALL set_grid( "W", glamt_crs, gphit_crs, zmask )
- !
- CALL set_grid_znl( gphit_crs )
- !
- CALL dom_grid_glo ! Return to parent grid domain
- !
- IF( ln_cfmeta ) THEN ! Add additional grid metadata
- CALL iom_set_domain_attr("grid_T", area = e1e2t_crs(nldi:nlei, nldj:nlej))
- CALL iom_set_domain_attr("grid_U", area = e1u_crs(nldi:nlei, nldj:nlej) * e2u_crs(nldi:nlei, nldj:nlej))
- CALL iom_set_domain_attr("grid_V", area = e1v_crs(nldi:nlei, nldj:nlej) * e2v_crs(nldi:nlei, nldj:nlej))
- CALL iom_set_domain_attr("grid_W", area = e1e2t_crs(nldi:nlei, nldj:nlej))
- CALL set_grid_bounds( "T", glamf_crs, gphif_crs, glamt_crs, gphit_crs )
- CALL set_grid_bounds( "U", glamv_crs, gphiv_crs, glamu_crs, gphiu_crs )
- CALL set_grid_bounds( "V", glamu_crs, gphiu_crs, glamv_crs, gphiv_crs )
- CALL set_grid_bounds( "W", glamf_crs, gphif_crs, glamt_crs, gphit_crs )
- ENDIF
- ENDIF
- ! vertical grid definition
- CALL iom_set_axis_attr( "deptht", gdept_1d )
- CALL iom_set_axis_attr( "depthu", gdept_1d )
- CALL iom_set_axis_attr( "depthv", gdept_1d )
- CALL iom_set_axis_attr( "depthw", gdepw_1d )
- ! Add vertical grid bounds
- #if ! defined key_xios2
- z_bnds(: ,1) = gdepw_1d(:)
- z_bnds(1:jpkm1,2) = gdepw_1d(2:jpk)
- z_bnds(jpk: ,2) = gdepw_1d(jpk) + e3t_1d(jpk)
- #else
- z_bnds(1 ,:) = gdepw_1d(:)
- z_bnds(2,1:jpkm1) = gdepw_1d(2:jpk)
- z_bnds(2,jpk: ) = gdepw_1d(jpk) + e3t_1d(jpk)
- #endif
- CALL iom_set_axis_attr( "deptht", bounds=z_bnds )
- CALL iom_set_axis_attr( "depthu", bounds=z_bnds )
- CALL iom_set_axis_attr( "depthv", bounds=z_bnds )
- #if ! defined key_xios2
- z_bnds(: ,2) = gdept_1d(:)
- z_bnds(2:jpk,1) = gdept_1d(1:jpkm1)
- z_bnds(1 ,1) = gdept_1d(1) - e3w_1d(1)
- #else
- z_bnds(2,: ) = gdept_1d(:)
- z_bnds(1,2:jpk) = gdept_1d(1:jpkm1)
- z_bnds(1,1 ) = gdept_1d(1) - e3w_1d(1)
- #endif
- CALL iom_set_axis_attr( "depthw", bounds=z_bnds )
- # if defined key_floats
- CALL iom_set_axis_attr( "nfloat", (/ (REAL(ji,wp), ji=1,nfloat) /) )
- # endif
- #if defined key_lim3 || defined key_lim2
- CALL iom_set_axis_attr( "ncatice", (/ (REAL(ji,wp), ji=1,jpl) /) )
- CALL iom_set_axis_attr( "nstrait", (/ (REAL(ji,wp), ji=1,4) /) )
- #endif
- CALL iom_set_axis_attr( "icbcla", class_num )
- CALL iom_set_axis_attr( "iax_20C", (/ REAL(20,wp) /) )
- CALL iom_set_axis_attr( "iax_28C", (/ REAL(28,wp) /) )
- CALL iom_set_axis_attr( "basin" , (/ (REAL(ji,wp), ji=1,5) /) )
-
- ! automatic definitions of some of the xml attributs
- CALL set_xmlatt
- ! end file definition
- dtime%second = rdt
- CALL xios_set_timestep(dtime)
- IF( .NOT. ll_noland .AND. .NOT. using_xios_coordinates) CALL dom_xios_create_coordinates
- CALL xios_close_context_definition()
-
- CALL xios_update_calendar(0)
- DEALLOCATE( z_bnds )
- #endif
-
- END SUBROUTINE iom_init
- SUBROUTINE iom_swap( cdname )
- !!---------------------------------------------------------------------
- !! *** SUBROUTINE iom_swap ***
- !!
- !! ** Purpose : swap context between different agrif grid for xmlio_server
- !!---------------------------------------------------------------------
- CHARACTER(len=*), INTENT(in) :: cdname
- #if defined key_iomput
- TYPE(xios_context) :: nemo_hdl
- IF( TRIM(Agrif_CFixed()) == '0' ) THEN
- CALL xios_get_handle(TRIM(cdname),nemo_hdl)
- ELSE
- CALL xios_get_handle(TRIM(Agrif_CFixed())//"_"//TRIM(cdname),nemo_hdl)
- ENDIF
- !
- CALL xios_set_current_context(nemo_hdl)
- #endif
- !
- END SUBROUTINE iom_swap
- SUBROUTINE iom_open( cdname, kiomid, ldwrt, kdom, kiolib, ldstop, ldiof )
- !!---------------------------------------------------------------------
- !! *** SUBROUTINE iom_open ***
- !!
- !! ** Purpose : open an input file (return 0 if not found)
- !!---------------------------------------------------------------------
- CHARACTER(len=*), INTENT(in ) :: cdname ! File name
- INTEGER , INTENT( out) :: kiomid ! iom identifier of the opened file
- LOGICAL , INTENT(in ), OPTIONAL :: ldwrt ! open in write modeb (default = .FALSE.)
- INTEGER , INTENT(in ), OPTIONAL :: kdom ! Type of domain to be written (default = jpdom_local_noovlap)
- INTEGER , INTENT(in ), OPTIONAL :: kiolib ! library used to open the file (default = jpnf90)
- LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if open to read a non-existing file (default = .TRUE.)
- LOGICAL , INTENT(in ), OPTIONAL :: ldiof ! Interp On the Fly, needed for AGRIF (default = .FALSE.)
- CHARACTER(LEN=256) :: clname ! the name of the file based on cdname [[+clcpu]+clcpu]
- CHARACTER(LEN=256) :: cltmpn ! tempory name to store clname (in writting mode)
- CHARACTER(LEN=10) :: clsuffix ! ".nc" or ".dimg"
- CHARACTER(LEN=15) :: clcpu ! the cpu number (max jpmax_digits digits)
- CHARACTER(LEN=256) :: clinfo ! info character
- LOGICAL :: llok ! check the existence
- LOGICAL :: llwrt ! local definition of ldwrt
- LOGICAL :: llnoov ! local definition to read overlap
- LOGICAL :: llstop ! local definition of ldstop
- LOGICAL :: lliof ! local definition of ldiof
- INTEGER :: iolib ! library do we use to open the file
- INTEGER :: icnt ! counter for digits in clcpu (max = jpmax_digits)
- INTEGER :: iln, ils ! lengths of character
- INTEGER :: idom ! type of domain
- INTEGER :: istop !
- INTEGER, DIMENSION(2,5) :: idompar ! domain parameters:
- ! local number of points for x,y dimensions
- ! position of first local point for x,y dimensions
- ! position of last local point for x,y dimensions
- ! start halo size for x,y dimensions
- ! end halo size for x,y dimensions
- !---------------------------------------------------------------------
- ! Initializations and control
- ! =============
- kiomid = -1
- clinfo = ' iom_open ~~~ '
- istop = nstop
- ! if iom_open is called for the first time: initialize iom_file(:)%nfid to 0
- ! (could be done when defining iom_file in f95 but not in f90)
- IF( Agrif_Root() ) THEN
- IF( iom_open_init == 0 ) THEN
- iom_file(:)%nfid = 0
- iom_open_init = 1
- ENDIF
- ENDIF
- ! do we read or write the file?
- IF( PRESENT(ldwrt) ) THEN ; llwrt = ldwrt
- ELSE ; llwrt = .FALSE.
- ENDIF
- ! do we call ctl_stop if we try to open a non-existing file in read mode?
- IF( PRESENT(ldstop) ) THEN ; llstop = ldstop
- ELSE ; llstop = .TRUE.
- ENDIF
- ! what library do we use to open the file?
- IF( PRESENT(kiolib) ) THEN ; iolib = kiolib
- ELSE ; iolib = jpnf90
- ENDIF
- ! are we using interpolation on the fly?
- IF( PRESENT(ldiof) ) THEN ; lliof = ldiof
- ELSE ; lliof = .FALSE.
- ENDIF
- ! do we read the overlap
- ! ugly patch SM+JMM+RB to overwrite global definition in some cases
- llnoov = (jpni * jpnj ) == jpnij .AND. .NOT. lk_agrif
- ! create the file name by added, if needed, TRIM(Agrif_CFixed()) and TRIM(clsuffix)
- ! =============
- clname = trim(cdname)
- IF ( .NOT. Agrif_Root() .AND. .NOT. lliof ) THEN
- iln = INDEX(clname,'/')
- cltmpn = clname(1:iln)
- clname = clname(iln+1:LEN_TRIM(clname))
- clname=TRIM(cltmpn)//TRIM(Agrif_CFixed())//'_'//TRIM(clname)
- ENDIF
- ! which suffix should we use?
- SELECT CASE (iolib)
- CASE (jpioipsl ) ; clsuffix = '.nc'
- CASE (jpnf90 ) ; clsuffix = '.nc'
- CASE (jprstdimg) ; clsuffix = '.dimg'
- CASE DEFAULT ; clsuffix = ''
- CALL ctl_stop( TRIM(clinfo), 'accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- ! Add the suffix if needed
- iln = LEN_TRIM(clname)
- ils = LEN_TRIM(clsuffix)
- IF( iln <= ils .OR. INDEX( TRIM(clname), TRIM(clsuffix), back = .TRUE. ) /= iln - ils + 1 ) &
- & clname = TRIM(clname)//TRIM(clsuffix)
- cltmpn = clname ! store this name
- ! try to find if the file to be opened already exist
- ! =============
- INQUIRE( FILE = clname, EXIST = llok )
- IF( .NOT.llok ) THEN
- ! we try to add the cpu number to the name
- IF( iolib == jprstdimg ) THEN ; WRITE(clcpu,*) narea
- ELSE ; WRITE(clcpu,*) narea-1
- ENDIF
- clcpu = TRIM(ADJUSTL(clcpu))
- iln = INDEX(clname,TRIM(clsuffix), back = .TRUE.)
- clname = clname(1:iln-1)//'_'//TRIM(clcpu)//TRIM(clsuffix)
- icnt = 0
- INQUIRE( FILE = clname, EXIST = llok )
- ! we try different formats for the cpu number by adding 0
- DO WHILE( .NOT.llok .AND. icnt < jpmax_digits )
- clcpu = "0"//trim(clcpu)
- clname = clname(1:iln-1)//'_'//TRIM(clcpu)//TRIM(clsuffix)
- INQUIRE( FILE = clname, EXIST = llok )
- icnt = icnt + 1
- END DO
- ENDIF
- IF( llwrt ) THEN
- ! check the domain definition
- ! JMM + SM: ugly patch before getting the new version of lib_mpp)
- ! idom = jpdom_local_noovlap ! default definition
- IF( llnoov ) THEN ; idom = jpdom_local_noovlap ! default definition
- ELSE ; idom = jpdom_local_full ! default definition
- ENDIF
- IF( PRESENT(kdom) ) idom = kdom
- ! create the domain informations
- ! =============
- SELECT CASE (idom)
- CASE (jpdom_local_full)
- idompar(:,1) = (/ jpi , jpj /)
- idompar(:,2) = (/ nimpp , njmpp /)
- idompar(:,3) = (/ nimpp + jpi - 1 , njmpp + jpj - 1 /)
- idompar(:,4) = (/ nldi - 1 , nldj - 1 /)
- idompar(:,5) = (/ jpi - nlei , jpj - nlej /)
- CASE (jpdom_local_noextra)
- idompar(:,1) = (/ nlci , nlcj /)
- idompar(:,2) = (/ nimpp , njmpp /)
- idompar(:,3) = (/ nimpp + nlci - 1, njmpp + nlcj - 1 /)
- idompar(:,4) = (/ nldi - 1 , nldj - 1 /)
- idompar(:,5) = (/ nlci - nlei , nlcj - nlej /)
- CASE (jpdom_local_noovlap)
- idompar(:,1) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
- idompar(:,2) = (/ nimpp + nldi - 1, njmpp + nldj - 1 /)
- idompar(:,3) = (/ nimpp + nlei - 1, njmpp + nlej - 1 /)
- idompar(:,4) = (/ 0 , 0 /)
- idompar(:,5) = (/ 0 , 0 /)
- CASE DEFAULT
- CALL ctl_stop( TRIM(clinfo), 'wrong value of kdom, only jpdom_local* cases are accepted' )
- END SELECT
- ENDIF
- ! Open the NetCDF or RSTDIMG file
- ! =============
- ! do we have some free file identifier?
- IF( MINVAL(iom_file(:)%nfid) /= 0 ) &
- & CALL ctl_stop( TRIM(clinfo), 'No more free file identifier', 'increase jpmax_files in iom_def' )
- ! if no file was found...
- IF( .NOT. llok ) THEN
- IF( .NOT. llwrt ) THEN ! we are in read mode
- IF( llstop ) THEN ; CALL ctl_stop( TRIM(clinfo), 'File '//TRIM(cltmpn)//'* not found' )
- ELSE ; istop = nstop + 1 ! make sure that istop /= nstop so we don't open the file
- ENDIF
- ELSE ! we are in write mode so we
- clname = cltmpn ! get back the file name without the cpu number
- ENDIF
- ELSE
- IF( llwrt .AND. .NOT. ln_clobber ) THEN ! we stop as we want to write in a new file
- CALL ctl_stop( TRIM(clinfo), 'We want to write in a new file but '//TRIM(clname)//' already exists...' )
- istop = nstop + 1 ! make sure that istop /= nstop so we don't open the file
- ELSEIF( llwrt ) THEN ! the file exists and we are in write mode with permission to
- clname = cltmpn ! overwrite so get back the file name without the cpu number
- ENDIF
- ENDIF
- IF( istop == nstop ) THEN ! no error within this routine
- SELECT CASE (iolib)
- CASE (jpioipsl ) ; CALL iom_ioipsl_open( clname, kiomid, llwrt, llok, idompar )
- CASE (jpnf90 ) ; CALL iom_nf90_open( clname, kiomid, llwrt, llok, idompar )
- CASE (jprstdimg) ; CALL iom_rstdimg_open( clname, kiomid, llwrt, llok, idompar )
- CASE DEFAULT
- CALL ctl_stop( TRIM(clinfo)//' accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- ENDIF
- !
- END SUBROUTINE iom_open
- SUBROUTINE iom_close( kiomid )
- !!--------------------------------------------------------------------
- !! *** SUBROUTINE iom_close ***
- !!
- !! ** Purpose : close an input file, or all files opened by iom
- !!--------------------------------------------------------------------
- INTEGER, INTENT(inout), OPTIONAL :: kiomid ! iom identifier of the file to be closed
- ! ! return 0 when file is properly closed
- ! ! No argument: all files opened by iom are closed
- INTEGER :: jf ! dummy loop indices
- INTEGER :: i_s, i_e ! temporary integer
- CHARACTER(LEN=100) :: clinfo ! info character
- !---------------------------------------------------------------------
- !
- clinfo = ' iom_close ~~~ '
- IF( PRESENT(kiomid) ) THEN
- i_s = kiomid
- i_e = kiomid
- ELSE
- i_s = 1
- i_e = jpmax_files
- ENDIF
- IF( i_s > 0 ) THEN
- DO jf = i_s, i_e
- IF( iom_file(jf)%nfid > 0 ) THEN
- SELECT CASE (iom_file(jf)%iolib)
- CASE (jpioipsl ) ; CALL iom_ioipsl_close( jf )
- CASE (jpnf90 ) ; CALL iom_nf90_close( jf )
- CASE (jprstdimg) ; CALL iom_rstdimg_close( jf )
- CASE DEFAULT
- CALL ctl_stop( TRIM(clinfo)//' accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- iom_file(jf)%nfid = 0 ! free the id
- IF( PRESENT(kiomid) ) kiomid = 0 ! return 0 as id to specify that the file was closed
- IF(lwp) WRITE(numout,*) TRIM(clinfo)//' close file: '//TRIM(iom_file(jf)%name)//' ok'
- ELSEIF( PRESENT(kiomid) ) THEN
- WRITE(ctmp1,*) '--->', kiomid
- CALL ctl_stop( TRIM(clinfo)//' Invalid file identifier', ctmp1 )
- ENDIF
- END DO
- ENDIF
- !
- END SUBROUTINE iom_close
- FUNCTION iom_varid ( kiomid, cdvar, kdimsz, kndims, ldstop )
- !!-----------------------------------------------------------------------
- !! *** FUNCTION iom_varid ***
- !!
- !! ** Purpose : get the id of a variable in a file (return 0 if not found)
- !!-----------------------------------------------------------------------
- INTEGER , INTENT(in ) :: kiomid ! file Identifier
- CHARACTER(len=*) , INTENT(in ) :: cdvar ! name of the variable
- INTEGER, DIMENSION(:), INTENT( out), OPTIONAL :: kdimsz ! size of the dimensions
- INTEGER, INTENT( out), OPTIONAL :: kndims ! size of the dimensions
- LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if looking for non-existing variable (default = .TRUE.)
- !
- INTEGER :: iom_varid, iiv, i_nvd
- LOGICAL :: ll_fnd
- CHARACTER(LEN=100) :: clinfo ! info character
- LOGICAL :: llstop ! local definition of ldstop
- !!-----------------------------------------------------------------------
- iom_varid = 0 ! default definition
- ! do we call ctl_stop if we look for non-existing variable?
- IF( PRESENT(ldstop) ) THEN ; llstop = ldstop
- ELSE ; llstop = .TRUE.
- ENDIF
- !
- IF( kiomid > 0 ) THEN
- clinfo = 'iom_varid, file: '//trim(iom_file(kiomid)%name)//', var: '//trim(cdvar)
- IF( iom_file(kiomid)%nfid == 0 ) THEN
- CALL ctl_stop( trim(clinfo), 'the file is not open' )
- ELSE
- ll_fnd = .FALSE.
- iiv = 0
- !
- DO WHILE ( .NOT.ll_fnd .AND. iiv < iom_file(kiomid)%nvars )
- iiv = iiv + 1
- ll_fnd = ( TRIM(cdvar) == TRIM(iom_file(kiomid)%cn_var(iiv)) )
- END DO
- !
- IF( .NOT.ll_fnd ) THEN
- iiv = iiv + 1
- IF( iiv <= jpmax_vars ) THEN
- SELECT CASE (iom_file(kiomid)%iolib)
- CASE (jpioipsl ) ; iom_varid = iom_ioipsl_varid( kiomid, cdvar, iiv, kdimsz )
- CASE (jpnf90 ) ; iom_varid = iom_nf90_varid ( kiomid, cdvar, iiv, kdimsz, kndims )
- CASE (jprstdimg) ; iom_varid = -1 ! all variables are listed in iom_file
- CASE DEFAULT
- CALL ctl_stop( TRIM(clinfo)//' accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- ELSE
- CALL ctl_stop( trim(clinfo), 'Too many variables in the file '//iom_file(kiomid)%name, &
- & 'increase the parameter jpmax_vars')
- ENDIF
- IF( llstop .AND. iom_varid == -1 ) CALL ctl_stop( TRIM(clinfo)//' not found' )
- ELSE
- iom_varid = iiv
- IF( PRESENT(kdimsz) ) THEN
- i_nvd = iom_file(kiomid)%ndims(iiv)
- IF( i_nvd == size(kdimsz) ) THEN
- kdimsz(:) = iom_file(kiomid)%dimsz(1:i_nvd,iiv)
- ELSE
- WRITE(ctmp1,*) i_nvd, size(kdimsz)
- CALL ctl_stop( trim(clinfo), 'error in kdimsz size'//trim(ctmp1) )
- ENDIF
- ENDIF
- IF( PRESENT(kndims) ) kndims = iom_file(kiomid)%ndims(iiv)
- ENDIF
- ENDIF
- ENDIF
- !
- END FUNCTION iom_varid
- !!----------------------------------------------------------------------
- !! INTERFACE iom_get
- !!----------------------------------------------------------------------
- SUBROUTINE iom_g0d( kiomid, cdvar, pvar, ktime )
- INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
- CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
- REAL(wp) , INTENT( out) :: pvar ! read field
- INTEGER , INTENT(in ), OPTIONAL :: ktime ! record number
- !
- INTEGER :: idvar ! variable id
- INTEGER :: idmspc ! number of spatial dimensions
- INTEGER , DIMENSION(1) :: itime ! record number
- CHARACTER(LEN=100) :: clinfo ! info character
- CHARACTER(LEN=100) :: clname ! file name
- CHARACTER(LEN=1) :: cldmspc !
- !
- itime = 1
- IF( PRESENT(ktime) ) itime = ktime
- !
- clname = iom_file(kiomid)%name
- clinfo = ' iom_g0d, file: '//trim(clname)//', var: '//trim(cdvar)
- !
- IF( kiomid > 0 ) THEN
- idvar = iom_varid( kiomid, cdvar )
- IF( iom_file(kiomid)%nfid > 0 .AND. idvar > 0 ) THEN
- idmspc = iom_file ( kiomid )%ndims( idvar )
- IF( iom_file(kiomid)%luld(idvar) ) idmspc = idmspc - 1
- WRITE(cldmspc , fmt='(i1)') idmspc
- IF( idmspc > 0 ) CALL ctl_stop( TRIM(clinfo), 'When reading to a 0D array, we do not accept data', &
- & 'with 1 or more spatial dimensions: '//cldmspc//' were found.' , &
- & 'Use ncwa -a to suppress the unnecessary dimensions' )
- SELECT CASE (iom_file(kiomid)%iolib)
- CASE (jpioipsl ) ; CALL iom_ioipsl_get( kiomid, idvar, pvar, itime )
- CASE (jpnf90 ) ; CALL iom_nf90_get( kiomid, idvar, pvar, itime )
- CASE (jprstdimg) ; CALL iom_rstdimg_get( kiomid, idvar, pvar )
- CASE DEFAULT
- CALL ctl_stop( 'iom_g0d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- ENDIF
- ENDIF
- END SUBROUTINE iom_g0d
- SUBROUTINE iom_g1d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount )
- INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
- INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
- CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
- REAL(wp) , INTENT( out), DIMENSION(:) :: pvar ! read field
- INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
- INTEGER , INTENT(in ), DIMENSION(1), OPTIONAL :: kstart ! start axis position of the reading
- INTEGER , INTENT(in ), DIMENSION(1), OPTIONAL :: kcount ! number of points in each axis
- !
- IF( kiomid > 0 ) THEN
- IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r1d=pvar, &
- & ktime=ktime, kstart=kstart, kcount=kcount )
- ENDIF
- END SUBROUTINE iom_g1d
- SUBROUTINE iom_g2d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, lrowattr )
- INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
- INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
- CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
- REAL(wp) , INTENT( out), DIMENSION(:,:) :: pvar ! read field
- INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
- INTEGER , INTENT(in ), DIMENSION(2) , OPTIONAL :: kstart ! start axis position of the reading
- INTEGER , INTENT(in ), DIMENSION(2) , OPTIONAL :: kcount ! number of points in each axis
- LOGICAL , INTENT(in ) , OPTIONAL :: lrowattr ! logical flag telling iom_get to
- ! look for and use a file attribute
- ! called open_ocean_jstart to set the start
- ! value for the 2nd dimension (netcdf only)
- !
- IF( kiomid > 0 ) THEN
- IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r2d=pvar, &
- & ktime=ktime, kstart=kstart, kcount=kcount, &
- & lrowattr=lrowattr )
- ENDIF
- END SUBROUTINE iom_g2d
- SUBROUTINE iom_g3d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, lrowattr )
- INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
- INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
- CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
- REAL(wp) , INTENT( out), DIMENSION(:,:,:) :: pvar ! read field
- INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
- INTEGER , INTENT(in ), DIMENSION(3) , OPTIONAL :: kstart ! start axis position of the reading
- INTEGER , INTENT(in ), DIMENSION(3) , OPTIONAL :: kcount ! number of points in each axis
- LOGICAL , INTENT(in ) , OPTIONAL :: lrowattr ! logical flag telling iom_get to
- ! look for and use a file attribute
- ! called open_ocean_jstart to set the start
- ! value for the 2nd dimension (netcdf only)
- !
- IF( kiomid > 0 ) THEN
- IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r3d=pvar, &
- & ktime=ktime, kstart=kstart, kcount=kcount, &
- & lrowattr=lrowattr )
- ENDIF
- END SUBROUTINE iom_g3d
- !!----------------------------------------------------------------------
- SUBROUTINE iom_get_123d( kiomid, kdom , cdvar , &
- & pv_r1d, pv_r2d, pv_r3d, &
- & ktime , kstart, kcount, &
- & lrowattr )
- !!-----------------------------------------------------------------------
- !! *** ROUTINE iom_get_123d ***
- !!
- !! ** Purpose : read a 1D/2D/3D variable
- !!
- !! ** Method : read ONE record at each CALL
- !!-----------------------------------------------------------------------
- INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
- INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
- CHARACTER(len=*) , INTENT(in ) :: cdvar ! Name of the variable
- REAL(wp), DIMENSION(:) , INTENT( out), OPTIONAL :: pv_r1d ! read field (1D case)
- REAL(wp), DIMENSION(:,:) , INTENT( out), OPTIONAL :: pv_r2d ! read field (2D case)
- REAL(wp), DIMENSION(:,:,:) , INTENT( out), OPTIONAL :: pv_r3d ! read field (3D case)
- INTEGER , INTENT(in ), OPTIONAL :: ktime ! record number
- INTEGER , DIMENSION(:) , INTENT(in ), OPTIONAL :: kstart ! start position of the reading in each axis
- INTEGER , DIMENSION(:) , INTENT(in ), OPTIONAL :: kcount ! number of points to be read in each axis
- LOGICAL , INTENT(in ), OPTIONAL :: lrowattr ! logical flag telling iom_get to
- ! look for and use a file attribute
- ! called open_ocean_jstart to set the start
- ! value for the 2nd dimension (netcdf only)
- !
- LOGICAL :: llnoov ! local definition to read overlap
- LOGICAL :: luse_jattr ! local definition to read open_ocean_jstart file attribute
- INTEGER :: jstartrow ! start point for 2nd dimension optionally set by file attribute
- INTEGER :: jl ! loop on number of dimension
- INTEGER :: idom ! type of domain
- INTEGER :: idvar ! id of the variable
- INTEGER :: inbdim ! number of dimensions of the variable
- INTEGER :: idmspc ! number of spatial dimensions
- INTEGER :: itime ! record number
- INTEGER :: istop ! temporary value of nstop
- INTEGER :: ix1, ix2, iy1, iy2 ! subdomain indexes
- INTEGER :: ji, jj ! loop counters
- INTEGER :: irankpv !
- INTEGER :: ind1, ind2 ! substring index
- INTEGER, DIMENSION(jpmax_dims) :: istart ! starting point to read for each axis
- INTEGER, DIMENSION(jpmax_dims) :: icnt ! number of value to read along each axis
- INTEGER, DIMENSION(jpmax_dims) :: idimsz ! size of the dimensions of the variable
- INTEGER, DIMENSION(jpmax_dims) :: ishape ! size of the dimensions of the variable
- REAL(wp) :: zscf, zofs ! sacle_factor and add_offset
- INTEGER :: itmp ! temporary integer
- CHARACTER(LEN=256) :: clinfo ! info character
- CHARACTER(LEN=256) :: clname ! file name
- CHARACTER(LEN=1) :: clrankpv, cldmspc !
- !---------------------------------------------------------------------
- !
- clname = iom_file(kiomid)%name ! esier to read
- clinfo = ' iom_get_123d, file: '//trim(clname)//', var: '//trim(cdvar)
- ! local definition of the domain ?
- idom = kdom
- ! do we read the overlap
- ! ugly patch SM+JMM+RB to overwrite global definition in some cases
- llnoov = (jpni * jpnj ) == jpnij .AND. .NOT. lk_agrif
- ! check kcount and kstart optionals parameters...
- IF( PRESENT(kcount) .AND. (.NOT. PRESENT(kstart)) ) CALL ctl_stop(trim(clinfo), 'kcount present needs kstart present')
- IF( PRESENT(kstart) .AND. (.NOT. PRESENT(kcount)) ) CALL ctl_stop(trim(clinfo), 'kstart present needs kcount present')
- IF( PRESENT(kstart) .AND. idom /= jpdom_unknown ) CALL ctl_stop(trim(clinfo), 'kstart present needs kdom = jpdom_unknown')
- luse_jattr = .false.
- IF( PRESENT(lrowattr) ) THEN
- IF( lrowattr .AND. idom /= jpdom_data ) CALL ctl_stop(trim(clinfo), 'lrowattr present and true needs kdom = jpdom_data')
- IF( lrowattr .AND. idom == jpdom_data ) luse_jattr = .true.
- ENDIF
- IF( luse_jattr ) THEN
- SELECT CASE (iom_file(kiomid)%iolib)
- CASE (jpioipsl, jprstdimg )
- CALL ctl_warn(trim(clinfo), 'lrowattr present and true but this only works with netcdf (jpnf90)')
- luse_jattr = .false.
- CASE (jpnf90 )
- ! Ok
- CASE DEFAULT
- CALL ctl_stop( TRIM(clinfo)//' accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- ENDIF
- ! Search for the variable in the data base (eventually actualize data)
- istop = nstop
- idvar = iom_varid( kiomid, cdvar )
- !
- IF( idvar > 0 ) THEN
- ! to write iom_file(kiomid)%dimsz in a shorter way !
- idimsz(:) = iom_file(kiomid)%dimsz(:, idvar)
- inbdim = iom_file(kiomid)%ndims(idvar) ! number of dimensions in the file
- idmspc = inbdim ! number of spatial dimensions in the file
- IF( iom_file(kiomid)%luld(idvar) ) idmspc = inbdim - 1
- IF( idmspc > 3 ) CALL ctl_stop(trim(clinfo), 'the file has more than 3 spatial dimensions this case is not coded...')
- !
- ! update idom definition...
- ! Identify the domain in case of jpdom_auto(glo/dta) definition
- IF( idom == jpdom_autoglo .OR. idom == jpdom_autodta ) THEN
- IF( idom == jpdom_autoglo ) THEN ; idom = jpdom_global
- ELSE ; idom = jpdom_data
- ENDIF
- ind1 = INDEX( clname, '_', back = .TRUE. ) + 1
- ind2 = INDEX( clname, '.', back = .TRUE. ) - 1
- IF( ind2 > ind1 ) THEN ; IF( VERIFY( clname(ind1:ind2), '0123456789' ) == 0 ) idom = jpdom_local ; ENDIF
- ENDIF
- ! Identify the domain in case of jpdom_local definition
- IF( idom == jpdom_local ) THEN
- IF( idimsz(1) == jpi .AND. idimsz(2) == jpj ) THEN ; idom = jpdom_local_full
- ELSEIF( idimsz(1) == nlci .AND. idimsz(2) == nlcj ) THEN ; idom = jpdom_local_noextra
- ELSEIF( idimsz(1) == (nlei - nldi + 1) .AND. idimsz(2) == (nlej - nldj + 1) ) THEN ; idom = jpdom_local_noovlap
- ELSE ; CALL ctl_stop( trim(clinfo), 'impossible to identify the local domain' )
- ENDIF
- ENDIF
- !
- ! check the consistency between input array and data rank in the file
- !
- ! initializations
- itime = 1
- IF( PRESENT(ktime) ) itime = ktime
- irankpv = 1 * COUNT( (/PRESENT(pv_r1d)/) ) + 2 * COUNT( (/PRESENT(pv_r2d)/) ) + 3 * COUNT( (/PRESENT(pv_r3d)/) )
- WRITE(clrankpv, fmt='(i1)') irankpv
- WRITE(cldmspc , fmt='(i1)') idmspc
- !
- IF( idmspc < irankpv ) THEN
- CALL ctl_stop( TRIM(clinfo), 'The file has only '//cldmspc//' spatial dimension', &
- & 'it is impossible to read a '//clrankpv//'D array from this file...' )
- ELSEIF( idmspc == irankpv ) THEN
- IF( PRESENT(pv_r1d) .AND. idom /= jpdom_unknown ) &
- & CALL ctl_stop( TRIM(clinfo), 'case not coded...You must use jpdom_unknown' )
- ELSEIF( idmspc > irankpv ) THEN
- IF( PRESENT(pv_r2d) .AND. itime == 1 .AND. idimsz(3) == 1 .AND. idmspc == 3 ) THEN
- CALL ctl_warn( trim(clinfo), '2D array but 3 spatial dimensions for the data...' , &
- & 'As the size of the z dimension is 1 and as we try to read the first record, ', &
- & 'we accept this case, even if there is a possible mix-up between z and time dimension' )
- idmspc = idmspc - 1
- ELSE
- CALL ctl_stop( TRIM(clinfo), 'To keep iom lisibility, when reading a '//clrankpv//'D array,' , &
- & 'we do not accept data with '//cldmspc//' spatial dimensions', &
- & 'Use ncwa -a to suppress the unnecessary dimensions' )
- ENDIF
- ENDIF
- !
- ! definition of istart and icnt
- !
- icnt (:) = 1
- istart(:) = 1
- istart(idmspc+1) = itime
- IF( PRESENT(kstart) ) THEN ; istart(1:idmspc) = kstart(1:idmspc) ; icnt(1:idmspc) = kcount(1:idmspc)
- ELSE
- IF( idom == jpdom_unknown ) THEN ; icnt(1:idmspc) = idimsz(1:idmspc)
- ELSE
- IF( .NOT. PRESENT(pv_r1d) ) THEN ! not a 1D array
- IF( idom == jpdom_data ) THEN
- jstartrow = 1
- IF( luse_jattr ) THEN
- CALL iom_getatt(kiomid, 'open_ocean_jstart', jstartrow ) ! -999 is returned if the attribute is not found
- jstartrow = MAX(1,jstartrow)
- ENDIF
- istart(1:2) = (/ mig(1), mjg(1) + jstartrow - 1 /) ! icnt(1:2) done below
- ELSEIF( idom == jpdom_global ) THEN ; istart(1:2) = (/ nimpp , njmpp /) ! icnt(1:2) done below
- ENDIF
- ! we do not read the overlap -> we start to read at nldi, nldj
- ! JMM + SM: ugly patch before getting the new version of lib_mpp)
- ! IF( idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /)
- IF( llnoov .AND. idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /)
- ! we do not read the overlap and the extra-halos -> from nldi to nlei and from nldj to nlej
- ! JMM + SM: ugly patch before getting the new version of lib_mpp)
- ! icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
- IF( llnoov ) THEN ; icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
- ELSE ; icnt(1:2) = (/ nlci , nlcj /)
- ENDIF
- IF( PRESENT(pv_r3d) ) THEN
- IF( idom == jpdom_data ) THEN ; icnt(3) = jpkdta
- ELSE ; icnt(3) = jpk
- ENDIF
- ENDIF
- ENDIF
- ENDIF
- ENDIF
- ! check that istart and icnt can be used with this file
- !-
- DO jl = 1, jpmax_dims
- itmp = istart(jl)+icnt(jl)-1
- IF( itmp > idimsz(jl) .AND. idimsz(jl) /= 0 ) THEN
- WRITE( ctmp1, FMT="('(istart(', i1, ') + icnt(', i1, ') - 1) = ', i5)" ) jl, jl, itmp
- WRITE( ctmp2, FMT="(' is larger than idimsz(', i1,') = ', i5)" ) jl, idimsz(jl)
- CALL ctl_stop( trim(clinfo), 'start and count too big regarding to the size of the data, ', ctmp1, ctmp2 )
- ENDIF
- END DO
- ! check that icnt matches the input array
- !-
- IF( idom == jpdom_unknown ) THEN
- IF( irankpv == 1 ) ishape(1:1) = SHAPE(pv_r1d)
- IF( irankpv == 2 ) ishape(1:2) = SHAPE(pv_r2d)
- IF( irankpv == 3 ) ishape(1:3) = SHAPE(pv_r3d)
- ctmp1 = 'd'
- ELSE
- IF( irankpv == 2 ) THEN
- ! JMM + SM: ugly patch before getting the new version of lib_mpp)
- ! ishape(1:2) = SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1 = 'd(nldi:nlei,nldj:nlej)'
- IF( llnoov ) THEN ; ishape(1:2)=SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1='d(nldi:nlei,nldj:nlej)'
- ELSE ; ishape(1:2)=SHAPE(pv_r2d(1 :nlci,1 :nlcj )) ; ctmp1='d(1:nlci,1:nlcj)'
- ENDIF
- ENDIF
- IF( irankpv == 3 ) THEN
- ! JMM + SM: ugly patch before getting the new version of lib_mpp)
- ! ishape(1:3) = SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1 = 'd(nldi:nlei,nldj:nlej,:)'
- IF( llnoov ) THEN ; ishape(1:3)=SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1='d(nldi:nlei,nldj:nlej,:)'
- ELSE ; ishape(1:3)=SHAPE(pv_r3d(1 :nlci,1 :nlcj,:)) ; ctmp1='d(1:nlci,1:nlcj,:)'
- ENDIF
- ENDIF
- ENDIF
-
- DO jl = 1, irankpv
- WRITE( ctmp2, FMT="(', ', i1,'): ', i5,' /= icnt(', i1,'):', i5)" ) jl, ishape(jl), jl, icnt(jl)
- IF( ishape(jl) /= icnt(jl) ) CALL ctl_stop( TRIM(clinfo), 'size(pv_r'//clrankpv//TRIM(ctmp1)//TRIM(ctmp2) )
- END DO
- ENDIF
- ! read the data
- !-
- IF( idvar > 0 .AND. istop == nstop ) THEN ! no additional errors until this point...
- !
- ! find the right index of the array to be read
- ! JMM + SM: ugly patch before getting the new version of lib_mpp)
- ! IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej
- ! ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
- ! ENDIF
- IF( llnoov ) THEN
- IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej
- ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
- ENDIF
- ELSE
- IF( idom /= jpdom_unknown ) THEN ; ix1 = 1 ; ix2 = nlci ; iy1 = 1 ; iy2 = nlcj
- ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
- ENDIF
- ENDIF
-
- SELECT CASE (iom_file(kiomid)%iolib)
- CASE (jpioipsl ) ; CALL iom_ioipsl_get( kiomid, idvar, inbdim, istart, icnt, ix1, ix2, iy1, iy2, &
- & pv_r1d, pv_r2d, pv_r3d )
- CASE (jpnf90 ) ; CALL iom_nf90_get( kiomid, idvar, inbdim, istart, icnt, ix1, ix2, iy1, iy2, &
- & pv_r1d, pv_r2d, pv_r3d )
- CASE (jprstdimg) ; CALL iom_rstdimg_get( kiomid, idom, idvar, ix1, ix2, iy1, iy2, &
- & pv_r1d, pv_r2d, pv_r3d )
- CASE DEFAULT
- CALL ctl_stop( TRIM(clinfo)//' accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- IF( istop == nstop ) THEN ! no additional errors until this point...
- IF(lwp) WRITE(numout,"(10x,' read ',a,' (rec: ',i6,') in ',a,' ok')") TRIM(cdvar), itime, TRIM(iom_file(kiomid)%name)
-
- !--- overlap areas and extra hallows (mpp)
- IF( PRESENT(pv_r2d) .AND. idom /= jpdom_unknown ) THEN
- CALL lbc_lnk( pv_r2d,'Z',-999.,'no0' )
- ELSEIF( PRESENT(pv_r3d) .AND. idom /= jpdom_unknown ) THEN
- ! this if could be simplified with the new lbc_lnk that works with any size of the 3rd dimension
- IF( icnt(3) == jpk ) THEN
- CALL lbc_lnk( pv_r3d,'Z',-999.,'no0' )
- ELSE ! put some arbitrary value (a call to lbc_lnk will be done later...)
- DO jj = nlcj+1, jpj ; pv_r3d(1:nlci, jj, :) = pv_r3d(1:nlci, nlej, :) ; END DO
- DO ji = nlci+1, jpi ; pv_r3d(ji , : , :) = pv_r3d(nlei , : , :) ; END DO
- ENDIF
- ENDIF
-
- ! C1D case : always call lbc_lnk to replicate the central value over the whole 3X3 domain
- IF( lk_c1d .AND. PRESENT(pv_r2d) ) CALL lbc_lnk( pv_r2d,'Z',1. )
- IF( lk_c1d .AND. PRESENT(pv_r3d) ) CALL lbc_lnk( pv_r3d,'Z',1. )
-
- !--- Apply scale_factor and offset
- zscf = iom_file(kiomid)%scf(idvar) ! scale factor
- zofs = iom_file(kiomid)%ofs(idvar) ! offset
- IF( PRESENT(pv_r1d) ) THEN
- IF( zscf /= 1. ) pv_r1d(:) = pv_r1d(:) * zscf
- IF( zofs /= 0. ) pv_r1d(:) = pv_r1d(:) + zofs
- ELSEIF( PRESENT(pv_r2d) ) THEN
- !CDIR COLLAPSE
- IF( zscf /= 1.) pv_r2d(:,:) = pv_r2d(:,:) * zscf
- !CDIR COLLAPSE
- IF( zofs /= 0.) pv_r2d(:,:) = pv_r2d(:,:) + zofs
- ELSEIF( PRESENT(pv_r3d) ) THEN
- !CDIR COLLAPSE
- IF( zscf /= 1.) pv_r3d(:,:,:) = pv_r3d(:,:,:) * zscf
- !CDIR COLLAPSE
- IF( zofs /= 0.) pv_r3d(:,:,:) = pv_r3d(:,:,:) + zofs
- ENDIF
- !
- ENDIF
- !
- ENDIF
- !
- END SUBROUTINE iom_get_123d
- SUBROUTINE iom_gettime( kiomid, ptime, cdvar, kntime, cdunits, cdcalendar )
- !!--------------------------------------------------------------------
- !! *** SUBROUTINE iom_gettime ***
- !!
- !! ** Purpose : read the time axis cdvar in the file
- !!--------------------------------------------------------------------
- INTEGER , INTENT(in ) :: kiomid ! file Identifier
- REAL(wp), DIMENSION(:) , INTENT( out) :: ptime ! the time axis
- CHARACTER(len=*), OPTIONAL , INTENT(in ) :: cdvar ! time axis name
- INTEGER , OPTIONAL , INTENT( out) :: kntime ! number of times in file
- CHARACTER(len=*), OPTIONAL , INTENT( out) :: cdunits ! units attribute of time coordinate
- CHARACTER(len=*), OPTIONAL , INTENT( out) :: cdcalendar ! calendar attribute of
- !
- INTEGER, DIMENSION(1) :: kdimsz
- INTEGER :: idvar ! id of the variable
- CHARACTER(LEN=32) :: tname ! local name of time coordinate
- CHARACTER(LEN=100) :: clinfo ! info character
- !---------------------------------------------------------------------
- !
- IF ( PRESENT(cdvar) ) THEN
- tname = cdvar
- ELSE
- tname = iom_file(kiomid)%uldname
- ENDIF
- IF( kiomid > 0 ) THEN
- clinfo = 'iom_gettime, file: '//trim(iom_file(kiomid)%name)//', var: '//trim(tname)
- IF ( PRESENT(kntime) ) THEN
- idvar = iom_varid( kiomid, tname, kdimsz = kdimsz )
- kntime = kdimsz(1)
- ELSE
- idvar = iom_varid( kiomid, tname )
- ENDIF
- !
- ptime(:) = 0. ! default definition
- IF( idvar > 0 ) THEN
- IF( iom_file(kiomid)%ndims(idvar) == 1 ) THEN
- IF( iom_file(kiomid)%luld(idvar) ) THEN
- IF( iom_file(kiomid)%dimsz(1,idvar) <= size(ptime) ) THEN
- SELECT CASE (iom_file(kiomid)%iolib)
- CASE (jpioipsl ) ; CALL iom_ioipsl_gettime( kiomid, idvar, ptime, cdunits, cdcalendar )
- CASE (jpnf90 ) ; CALL iom_nf90_gettime( kiomid, idvar, ptime, cdunits, cdcalendar )
- CASE (jprstdimg) ; CALL ctl_stop( TRIM(clinfo)//' case IO library == jprstdimg not coded...' )
- CASE DEFAULT
- CALL ctl_stop( TRIM(clinfo)//' accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- ELSE
- WRITE(ctmp1,*) 'error with the size of ptime ',size(ptime),iom_file(kiomid)%dimsz(1,idvar)
- CALL ctl_stop( trim(clinfo), trim(ctmp1) )
- ENDIF
- ELSE
- CALL ctl_stop( trim(clinfo), 'variable dimension is not unlimited... use iom_get' )
- ENDIF
- ELSE
- CALL ctl_stop( trim(clinfo), 'the variable has more than 1 dimension' )
- ENDIF
- ELSE
- CALL ctl_stop( trim(clinfo), 'variable not found in '//iom_file(kiomid)%name )
- ENDIF
- ENDIF
- !
- END SUBROUTINE iom_gettime
- !!----------------------------------------------------------------------
- !! INTERFACE iom_getatt
- !!----------------------------------------------------------------------
- SUBROUTINE iom_g0d_intatt( kiomid, cdatt, pvar )
- INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
- CHARACTER(len=*), INTENT(in ) :: cdatt ! Name of the attribute
- INTEGER , INTENT( out) :: pvar ! read field
- !
- IF( kiomid > 0 ) THEN
- IF( iom_file(kiomid)%nfid > 0 ) THEN
- SELECT CASE (iom_file(kiomid)%iolib)
- CASE (jpioipsl ) ; CALL ctl_stop('iom_getatt: only nf90 available')
- CASE (jpnf90 ) ; CALL iom_nf90_getatt( kiomid, cdatt, pvar )
- CASE (jprstdimg) ; CALL ctl_stop('iom_getatt: only nf90 available')
- CASE DEFAULT
- CALL ctl_stop( 'iom_g0d_att: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- ENDIF
- ENDIF
- END SUBROUTINE iom_g0d_intatt
- !!----------------------------------------------------------------------
- !! INTERFACE iom_rstput
- !!----------------------------------------------------------------------
- SUBROUTINE iom_rp0d( kt, kwrite, kiomid, cdvar, pvar, ktype )
- INTEGER , INTENT(in) :: kt ! ocean time-step
- INTEGER , INTENT(in) :: kwrite ! writing time-step
- INTEGER , INTENT(in) :: kiomid ! Identifier of the file
- CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
- REAL(wp) , INTENT(in) :: pvar ! written field
- INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
- INTEGER :: ivid ! variable id
- IF( kiomid > 0 ) THEN
- IF( iom_file(kiomid)%nfid > 0 ) THEN
- ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
- SELECT CASE (iom_file(kiomid)%iolib)
- CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r0d = pvar )
- CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r0d = pvar )
- CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, ivid, pvar )
- CASE DEFAULT
- CALL ctl_stop( 'iom_rp0d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- ENDIF
- ENDIF
- END SUBROUTINE iom_rp0d
- SUBROUTINE iom_rp1d( kt, kwrite, kiomid, cdvar, pvar, ktype )
- INTEGER , INTENT(in) :: kt ! ocean time-step
- INTEGER , INTENT(in) :: kwrite ! writing time-step
- INTEGER , INTENT(in) :: kiomid ! Identifier of the file
- CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
- REAL(wp) , INTENT(in), DIMENSION( :) :: pvar ! written field
- INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
- INTEGER :: ivid ! variable id
- IF( kiomid > 0 ) THEN
- IF( iom_file(kiomid)%nfid > 0 ) THEN
- ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
- SELECT CASE (iom_file(kiomid)%iolib)
- CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r1d = pvar )
- CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r1d = pvar )
- CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, ivid, pv_r1d = pvar )
- CASE DEFAULT
- CALL ctl_stop( 'iom_rp1d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- ENDIF
- ENDIF
- END SUBROUTINE iom_rp1d
- SUBROUTINE iom_rp2d( kt, kwrite, kiomid, cdvar, pvar, ktype )
- INTEGER , INTENT(in) :: kt ! ocean time-step
- INTEGER , INTENT(in) :: kwrite ! writing time-step
- INTEGER , INTENT(in) :: kiomid ! Identifier of the file
- CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
- REAL(wp) , INTENT(in), DIMENSION(:, : ) :: pvar ! written field
- INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
- INTEGER :: ivid ! variable id
- IF( kiomid > 0 ) THEN
- IF( iom_file(kiomid)%nfid > 0 ) THEN
- ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
- SELECT CASE (iom_file(kiomid)%iolib)
- CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r2d = pvar )
- CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r2d = pvar )
- CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, ivid, pv_r2d = pvar )
- CASE DEFAULT
- CALL ctl_stop( 'iom_rp2d: accepted IO library are only jpioipsl, jpnf90 and jprstdimg' )
- END SELECT
- ENDIF
- ENDIF
- END SUBROUTINE iom_rp2d
- SUBROUTINE iom_rp3d( kt, kwrite, kiomid, cdvar, pvar, ktype )
- INTEGER , INTENT(in) :: kt ! ocean time-step
- INTEGER , INTENT(in) :: kwrite ! writing time-step
- INTEGER , INTENT(in) :: kiomid ! Identifier of the file
- CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
- REAL(wp) , INTENT(in), DIMENSION(:,:,:) :: pvar ! written field
- INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
- INTEGER :: ivid ! variable id
- IF( kiomid > 0 ) THEN
- IF( iom_file(kiomid)%nfid > 0 ) THEN
- ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
- SELECT CASE (iom_file(kiomid)%iolib)
- CASE (jpioipsl ) ; CALL iom_ioipsl_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r3d = pvar )
- CASE (jpnf90 ) ; CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r3d = pvar )
- CASE (jprstdimg) ; IF( kt == kwrite ) CALL iom_rstdimg_rstput( kiomid, cdvar, ivid, pv_r3d = pvar )
- CASE DEFAULT
- CALL ctl_stop( 'iom_rp3d: accepted IO library are only jpioipsl and jprstdimg' )
- END SELECT
- ENDIF
- ENDIF
- END SUBROUTINE iom_rp3d
- !!----------------------------------------------------------------------
- !! INTERFACE iom_put
- !!----------------------------------------------------------------------
- SUBROUTINE iom_p0d( cdname, pfield0d )
- CHARACTER(LEN=*), INTENT(in) :: cdname
- REAL(wp) , INTENT(in) :: pfield0d
- REAL(wp) , DIMENSION(jpi,jpj) :: zz ! masson
- #if defined key_iomput
- zz(:,:)=pfield0d
- CALL xios_send_field(cdname, zz)
- !CALL xios_send_field(cdname, (/pfield0d/))
- #else
- IF( .FALSE. ) WRITE(numout,*) cdname, pfield0d ! useless test to avoid compilation warnings
- #endif
- END SUBROUTINE iom_p0d
- SUBROUTINE iom_p1d( cdname, pfield1d )
- CHARACTER(LEN=*) , INTENT(in) :: cdname
- REAL(wp), DIMENSION(:), INTENT(in) :: pfield1d
- #if defined key_iomput
- CALL xios_send_field( cdname, RESHAPE( (/pfield1d/), (/1,1,SIZE(pfield1d)/) ) )
- #else
- IF( .FALSE. ) WRITE(numout,*) cdname, pfield1d ! useless test to avoid compilation warnings
- #endif
- END SUBROUTINE iom_p1d
- SUBROUTINE iom_p2d( cdname, pfield2d )
- CHARACTER(LEN=*) , INTENT(in) :: cdname
- REAL(wp), DIMENSION(:,:), INTENT(in) :: pfield2d
- #if defined key_iomput
- CALL xios_send_field(cdname, pfield2d)
- #else
- IF( .FALSE. ) WRITE(numout,*) cdname, pfield2d ! useless test to avoid compilation warnings
- #endif
- END SUBROUTINE iom_p2d
- SUBROUTINE iom_p3d( cdname, pfield3d )
- CHARACTER(LEN=*) , INTENT(in) :: cdname
- REAL(wp), DIMENSION(:,:,:), INTENT(in) :: pfield3d
- #if defined key_iomput
- CALL xios_send_field(cdname, pfield3d)
- #else
- IF( .FALSE. ) WRITE(numout,*) cdname, pfield3d ! useless test to avoid compilation warnings
- #endif
- END SUBROUTINE iom_p3d
- SUBROUTINE iom_p4d( cdname, pfield4d )
- CHARACTER(LEN=*) , INTENT(in) :: cdname
- REAL(wp), DIMENSION(:,:,:,:), INTENT(in) :: pfield4d
- #if defined key_iomput
- CALL xios_send_field(cdname, pfield4d)
- #else
- IF( .FALSE. ) WRITE(numout,*) cdname, pfield4d ! useless test to avoid compilation warnings
- #endif
- END SUBROUTINE iom_p4d
- !!----------------------------------------------------------------------
- #if defined key_iomput
- SUBROUTINE iom_set_domain_attr( cdid, ni_glo, nj_glo, ibegin, jbegin, ni, nj, zoom_ibegin, zoom_jbegin, zoom_ni, zoom_nj, &
- & data_dim, data_ibegin, data_ni, data_jbegin, data_nj, lonvalue, latvalue, mask, &
- & nvertex, bounds_lon, bounds_lat, area )
- CHARACTER(LEN=*) , INTENT(in) :: cdid
- INTEGER , OPTIONAL, INTENT(in) :: ni_glo, nj_glo, ibegin, jbegin, ni, nj
- INTEGER , OPTIONAL, INTENT(in) :: data_dim, data_ibegin, data_ni, data_jbegin, data_nj
- INTEGER , OPTIONAL, INTENT(in) :: zoom_ibegin, zoom_jbegin, zoom_ni, zoom_nj, nvertex
- REAL(wp), DIMENSION(:) , OPTIONAL, INTENT(in) :: lonvalue, latvalue
- REAL(wp), DIMENSION(:,:) , OPTIONAL, INTENT(in) :: bounds_lon, bounds_lat, area
- #if ! defined key_xios2
- LOGICAL, DIMENSION(:,:) , OPTIONAL, INTENT(in) :: mask
- #else
- LOGICAL, DIMENSION(:) , OPTIONAL, INTENT(in) :: mask
- #endif
- #if ! defined key_xios2
- IF ( xios_is_valid_domain (cdid) ) THEN
- CALL xios_set_domain_attr ( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
- & data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
- & zoom_ibegin=zoom_ibegin, zoom_jbegin=zoom_jbegin, zoom_ni=zoom_ni, zoom_nj=zoom_nj, &
- & lonvalue=lonvalue, latvalue=latvalue, mask=mask, nvertex=nvertex, bounds_lon=bounds_lon, &
- & bounds_lat=bounds_lat, area=area )
- ENDIF
- IF ( xios_is_valid_domaingroup(cdid) ) THEN
- CALL xios_set_domaingroup_attr( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
- & data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
- & zoom_ibegin=zoom_ibegin, zoom_jbegin=zoom_jbegin, zoom_ni=zoom_ni, zoom_nj=zoom_nj, &
- & lonvalue=lonvalue, latvalue=latvalue, mask=mask, nvertex=nvertex, bounds_lon=bounds_lon, &
- & bounds_lat=bounds_lat, area=area )
- ENDIF
- #else
- IF ( xios_is_valid_domain (cdid) ) THEN
- CALL xios_set_domain_attr ( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
- & data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
- & lonvalue_1D=lonvalue, latvalue_1D=latvalue, mask_1D=mask, nvertex=nvertex, bounds_lon_1D=bounds_lon, &
- & bounds_lat_1D=bounds_lat, area=area, type='curvilinear')
- ENDIF
- IF ( xios_is_valid_domaingroup(cdid) ) THEN
- CALL xios_set_domaingroup_attr( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
- & data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
- & lonvalue_1D=lonvalue, latvalue_1D=latvalue, mask_1D=mask, nvertex=nvertex, bounds_lon_1D=bounds_lon, &
- & bounds_lat_1D=bounds_lat, area=area, type='curvilinear' )
- ENDIF
- #endif
- CALL xios_solve_inheritance()
- END SUBROUTINE iom_set_domain_attr
- #if defined key_xios2
- SUBROUTINE iom_set_zoom_domain_attr( cdid, ibegin, jbegin, ni, nj)
- CHARACTER(LEN=*) , INTENT(in) :: cdid
- INTEGER , OPTIONAL, INTENT(in) :: ibegin, jbegin, ni, nj
- IF ( xios_is_valid_zoom_domain (cdid) ) THEN
- CALL xios_set_zoom_domain_attr ( cdid, ibegin=ibegin, jbegin=jbegin, ni=ni, &
- & nj=nj)
- ENDIF
- END SUBROUTINE iom_set_zoom_domain_attr
- #endif
- SUBROUTINE iom_set_axis_attr( cdid, paxis, bounds )
- CHARACTER(LEN=*) , INTENT(in) :: cdid
- REAL(wp), DIMENSION(:) , OPTIONAL, INTENT(in) :: paxis
- REAL(wp), DIMENSION(:,:) , OPTIONAL, INTENT(in) :: bounds
- IF ( PRESENT(paxis) ) THEN
- #if ! defined key_xios2
- IF ( xios_is_valid_axis (cdid) ) CALL xios_set_axis_attr ( cdid, size=SIZE(paxis), value=paxis )
- IF ( xios_is_valid_axisgroup(cdid) ) CALL xios_set_axisgroup_attr( cdid, size=SIZE(paxis), value=paxis )
- #else
- IF ( xios_is_valid_axis (cdid) ) CALL xios_set_axis_attr ( cdid, n_glo=SIZE(paxis), value=paxis )
- IF ( xios_is_valid_axisgroup(cdid) ) CALL xios_set_axisgroup_attr( cdid, n_glo=SIZE(paxis), value=paxis )
- #endif
- ENDIF
- IF ( xios_is_valid_axis (cdid) ) CALL xios_set_axis_attr ( cdid, bounds=bounds )
- IF ( xios_is_valid_axisgroup(cdid) ) CALL xios_set_axisgroup_attr( cdid, bounds=bounds )
- CALL xios_solve_inheritance()
- END SUBROUTINE iom_set_axis_attr
- SUBROUTINE iom_set_field_attr( cdid, freq_op, freq_offset )
- CHARACTER(LEN=*) , INTENT(in) :: cdid
- #if ! defined key_xios2
- CHARACTER(LEN=*) ,OPTIONAL , INTENT(in) :: freq_op
- CHARACTER(LEN=*) ,OPTIONAL , INTENT(in) :: freq_offset
- #else
- TYPE(xios_duration),OPTIONAL , INTENT(in) :: freq_op
- TYPE(xios_duration),OPTIONAL , INTENT(in) :: freq_offset
- #endif
- IF ( xios_is_valid_field (cdid) ) CALL xios_set_field_attr &
- & ( cdid, freq_op=freq_op, freq_offset=freq_offset )
- IF ( xios_is_valid_fieldgroup(cdid) ) CALL xios_set_fieldgroup_attr &
- & ( cdid, freq_op=freq_op, freq_offset=freq_offset )
- CALL xios_solve_inheritance()
- END SUBROUTINE iom_set_field_attr
- SUBROUTINE iom_set_file_attr( cdid, name, name_suffix )
- CHARACTER(LEN=*) , INTENT(in) :: cdid
- CHARACTER(LEN=*),OPTIONAL , INTENT(in) :: name, name_suffix
- IF ( xios_is_valid_file (cdid) ) CALL xios_set_file_attr ( cdid, name=name, name_suffix=name_suffix )
- IF ( xios_is_valid_filegroup(cdid) ) CALL xios_set_filegroup_attr( cdid, name=name, name_suffix=name_suffix )
- CALL xios_solve_inheritance()
- END SUBROUTINE iom_set_file_attr
- SUBROUTINE iom_get_file_attr( cdid, name, name_suffix, output_freq )
- CHARACTER(LEN=*) , INTENT(in ) :: cdid
- CHARACTER(LEN=*),OPTIONAL , INTENT(out) :: name, name_suffix
- #if ! defined key_xios2
- CHARACTER(LEN=*),OPTIONAL , INTENT(out) :: output_freq
- #else
- TYPE(xios_duration) ,OPTIONAL , INTENT(out) :: output_freq
- #endif
- LOGICAL :: llexist1,llexist2,llexist3
- !---------------------------------------------------------------------
- IF( PRESENT( name ) ) name = '' ! default values
- IF( PRESENT( name_suffix ) ) name_suffix = ''
- #if ! defined key_xios2
- IF( PRESENT( output_freq ) ) output_freq = ''
- #else
- IF( PRESENT( output_freq ) ) output_freq = xios_duration(0,0,0,0,0,0)
- #endif
- IF ( xios_is_valid_file (cdid) ) THEN
- CALL xios_solve_inheritance()
- CALL xios_is_defined_file_attr ( cdid, name = llexist1, name_suffix = llexist2, output_freq = llexist3)
- IF(llexist1) CALL xios_get_file_attr ( cdid, name = name )
- IF(llexist2) CALL xios_get_file_attr ( cdid, name_suffix = name_suffix )
- IF(llexist3) CALL xios_get_file_attr ( cdid, output_freq = output_freq )
- ENDIF
- IF ( xios_is_valid_filegroup(cdid) ) THEN
- CALL xios_solve_inheritance()
- CALL xios_is_defined_filegroup_attr( cdid, name = llexist1, name_suffix = llexist2, output_freq = llexist3)
- IF(llexist1) CALL xios_get_filegroup_attr( cdid, name = name )
- IF(llexist2) CALL xios_get_filegroup_attr( cdid, name_suffix = name_suffix )
- IF(llexist3) CALL xios_get_filegroup_attr( cdid, output_freq = output_freq )
- ENDIF
- END SUBROUTINE iom_get_file_attr
- SUBROUTINE iom_set_grid_attr( cdid, mask )
- CHARACTER(LEN=*) , INTENT(in) :: cdid
- LOGICAL, DIMENSION(:,:,:), OPTIONAL, INTENT(in) :: mask
- #if ! defined key_xios2
- IF ( xios_is_valid_grid (cdid) ) CALL xios_set_grid_attr ( cdid, mask=mask )
- IF ( xios_is_valid_gridgroup(cdid) ) CALL xios_set_gridgroup_attr( cdid, mask=mask )
- #else
- IF ( xios_is_valid_grid (cdid) ) CALL xios_set_grid_attr ( cdid, mask_3D=mask )
- IF ( xios_is_valid_gridgroup(cdid) ) CALL xios_set_gridgroup_attr( cdid, mask_3D=mask )
- #endif
- CALL xios_solve_inheritance()
- END SUBROUTINE iom_set_grid_attr
- SUBROUTINE iom_setkt( kt, cdname )
- INTEGER , INTENT(in) :: kt
- CHARACTER(LEN=*), INTENT(in) :: cdname
- !
- CALL iom_swap( cdname ) ! swap to cdname context
- CALL xios_update_calendar(kt)
- IF( .NOT. ll_noland .AND. .NOT. using_xios_coordinates ) CALL dom_xios_write_coordinates
- IF( cdname /= TRIM(cxios_context) ) CALL iom_swap( TRIM(cxios_context) ) ! return back to nemo context
- !
- END SUBROUTINE iom_setkt
- SUBROUTINE iom_context_finalize( cdname )
- CHARACTER(LEN=*), INTENT(in) :: cdname
- !
- IF( xios_is_valid_context(cdname) ) THEN
- CALL iom_swap( cdname ) ! swap to cdname context
- CALL xios_context_finalize() ! finalize the context
- IF( cdname /= TRIM(cxios_context) ) CALL iom_swap( TRIM(cxios_context) ) ! return back to nemo context
- ENDIF
- !
- END SUBROUTINE iom_context_finalize
- SUBROUTINE set_grid_xios( grid_name, lon, lat, bounds_lon, bounds_lat, area, mask )
-
- CHARACTER(LEN=*) , INTENT(in) :: grid_name
- REAL(wp), DIMENSION(n_ni,n_nj) , INTENT(in) :: lon
- REAL(wp), DIMENSION(n_ni,n_nj) , INTENT(in) :: lat
- REAL(wp), DIMENSION(4,n_ni,n_nj) , INTENT(in) :: bounds_lon
- REAL(wp), DIMENSION(4,n_ni,n_nj) , INTENT(in) :: bounds_lat
- REAL(wp), DIMENSION(n_ni,n_nj) , INTENT(in) :: area
- LOGICAL, DIMENSION(n_ni,n_nj,jpk), INTENT(in) :: mask
- #if ! defined key_xios2
- CALL iom_set_domain_attr(grid_name, ni_glo=jpiglo, nj_glo=jpjglo, ibegin=n_ibegin, jbegin=n_jbegin, ni=n_ni, nj=n_nj)
- #else
- CALL iom_set_domain_attr(grid_name, ni_glo=jpiglo, nj_glo=jpjglo, ibegin=n_ibegin-1, jbegin=n_jbegin-1, ni=n_ni, nj=n_nj)
- #endif
- CALL iom_set_domain_attr(grid_name, data_dim=2, data_ibegin=n_data_ibegin, data_ni=n_data_ni, data_jbegin=n_data_jbegin, data_nj=n_data_nj)
- CALL iom_set_domain_attr(grid_name, latvalue=RESHAPE(lat,(/ n_ni*n_nj /)), lonvalue=RESHAPE(lon,(/ n_ni*n_nj /)))
- CALL iom_set_domain_attr(grid_name, bounds_lat=RESHAPE(bounds_lat,(/ 4,n_ni*n_nj /)), bounds_lon=RESHAPE(bounds_lon,(/ 4,n_ni*n_nj /)))
- CALL iom_set_domain_attr(grid_name, nvertex=4, area=area)
- ! Axis distribution needed for reduction of grid_U
- IF( grid_name .EQ. "grid_U" ) THEN
- IF ( xios_is_valid_axis ("cumul_U")) THEN
- CALL xios_set_axis_attr( "cumul_U", n=n_ni)
- CALL xios_set_axis_attr( "cumul_U", begin=n_ibegin-1)
- ENDIF
- ENDIF
- IF( ln_mskland ) THEN
- ! mask land points, keep values on coast line -> specific mask for U, V and W points
- #if ! defined key_xios2
- CALL iom_set_domain_attr(grid_name, mask=mask(:,:,1))
- #else
- CALL iom_set_domain_attr(grid_name, mask=RESHAPE(mask(:,:,1),(/ n_ni*n_nj /)))
- #endif
- CALL iom_set_grid_attr(grid_name//"_3D", mask)
- ENDIF
-
- END SUBROUTINE set_grid_xios
-
-
- SUBROUTINE set_grid( cdgrd, plon, plat, pmask )
- !!----------------------------------------------------------------------
- !! *** ROUTINE set_grid ***
- !!
- !! ** Purpose : define horizontal grids
- !!
- !!----------------------------------------------------------------------
- CHARACTER(LEN=1) , INTENT(in) :: cdgrd
- REAL(wp), DIMENSION(jpi,jpj) , INTENT(in) :: plon
- REAL(wp), DIMENSION(jpi,jpj) , INTENT(in) :: plat
- REAL(wp), DIMENSION(jpi,jpj,jpk), INTENT(in) :: pmask
- !
- INTEGER :: ni,nj
-
- ni=nlei-nldi+1 ; nj=nlej-nldj+1
- #if ! defined key_xios2
- CALL iom_set_domain_attr("grid_"//cdgrd, ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-1, jbegin=njmpp+nldj-1, ni=ni, nj=nj)
- #else
- CALL iom_set_domain_attr("grid_"//cdgrd, ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-2, jbegin=njmpp+nldj-2, ni=ni, nj=nj)
- #endif
- CALL iom_set_domain_attr("grid_"//cdgrd, data_dim=2, data_ibegin = 1-nldi, data_ni = jpi, data_jbegin = 1-nldj, data_nj = jpj)
- CALL iom_set_domain_attr("grid_"//cdgrd, lonvalue = RESHAPE(plon(nldi:nlei, nldj:nlej),(/ ni*nj /)), &
- & latvalue = RESHAPE(plat(nldi:nlei, nldj:nlej),(/ ni*nj /)))
- ! Axis distribution needed for reduction of grid_U
- IF( cdgrd .EQ. "U" ) THEN
- IF ( xios_is_valid_axis ("cumul_U")) THEN
- CALL xios_set_axis_attr( "cumul_U", n=ni)
- CALL xios_set_axis_attr( "cumul_U", begin=nimpp+nldi-2)
- ENDIF
- ENDIF
-
- IF ( ln_mskland ) THEN
- !
- #if ! defined key_xios2
- CALL iom_set_domain_attr( "grid_"//cdgrd , mask = RESHAPE(pmask(nldi:nlei,nldj:nlej,1),(/ni,nj /)) /= 0. )
- #else
- CALL iom_set_domain_attr( "grid_"//cdgrd , mask = RESHAPE(pmask(nldi:nlei,nldj:nlej,1),(/ni*nj /)) /= 0. )
- #endif
- CALL iom_set_grid_attr ( "grid_"//cdgrd//"_3D", mask = RESHAPE(pmask(nldi:nlei,nldj:nlej,:),(/ni,nj,jpk/)) /= 0. )
- ENDIF
-
- END SUBROUTINE set_grid
- SUBROUTINE set_grid_bounds( cdgrd, plon_cnr, plat_cnr, plon_pnt, plat_pnt )
- !!----------------------------------------------------------------------
- !! *** ROUTINE set_grid_bounds ***
- !!
- !! ** Purpose : define horizontal grid corners
- !!
- !!----------------------------------------------------------------------
- CHARACTER(LEN=1) , INTENT(in) :: cdgrd
- !
- REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plon_cnr, plat_cnr ! Lat/lon coordinates of a contiguous vertex of cell (i,j)
- REAL(wp), DIMENSION(jpi,jpj), OPTIONAL, INTENT(in) :: plon_pnt, plat_pnt ! Lat/lon coordinates of the point of cell (i,j)
- !
- REAL(wp), ALLOCATABLE, DIMENSION(:,:,:,:) :: z_bnds ! Lat/lon coordinates of the vertices of cell (i,j)
- REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: z_fld ! Working array to determine where to rotate cells
- REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: z_rot ! Lat/lon working array for rotation of cells
- !
- INTEGER :: icnr, jcnr ! Offset such that the vertex coordinate (i+icnr,j+jcnr)
- ! ! represents the bottom-left corner of cell (i,j)
- INTEGER :: ji, jj, jn, ni, nj
- ALLOCATE( z_bnds(4,jpi,jpj,2), z_fld(jpi,jpj), z_rot(4,2) )
- ! Offset of coordinate representing bottom-left corner
- SELECT CASE ( TRIM(cdgrd) )
- CASE ('T', 'W')
- icnr = -1 ; jcnr = -1
- CASE ('U')
- icnr = 0 ; jcnr = -1
- CASE ('V')
- icnr = -1 ; jcnr = 0
- END SELECT
- ni = nlei-nldi+1 ; nj = nlej-nldj+1 ! Dimensions of subdomain interior
- z_fld(:,:) = 1._wp
- CALL lbc_lnk( z_fld, cdgrd, -1. ) ! Working array for location of northfold
- ! Cell vertices that can be defined
- DO jj = 2, jpjm1
- DO ji = 2, jpim1
- z_bnds(1,ji,jj,1) = plat_cnr(ji+icnr, jj+jcnr ) ! Bottom-left
- z_bnds(2,ji,jj,1) = plat_cnr(ji+icnr+1,jj+jcnr ) ! Bottom-right
- z_bnds(3,ji,jj,1) = plat_cnr(ji+icnr+1,jj+jcnr+1) ! Top-right
- z_bnds(4,ji,jj,1) = plat_cnr(ji+icnr, jj+jcnr+1) ! Top-left
- z_bnds(1,ji,jj,2) = plon_cnr(ji+icnr, jj+jcnr ) ! Bottom-left
- z_bnds(2,ji,jj,2) = plon_cnr(ji+icnr+1,jj+jcnr ) ! Bottom-right
- z_bnds(3,ji,jj,2) = plon_cnr(ji+icnr+1,jj+jcnr+1) ! Top-right
- z_bnds(4,ji,jj,2) = plon_cnr(ji+icnr, jj+jcnr+1) ! Top-left
- END DO
- END DO
- ! Cell vertices on boundries
- DO jn = 1, 4
- CALL lbc_lnk( z_bnds(jn,:,:,1), cdgrd, 1., pval=999._wp )
- CALL lbc_lnk( z_bnds(jn,:,:,2), cdgrd, 1., pval=999._wp )
- END DO
- ! Zero-size cells at closed boundaries if cell points provided,
- ! otherwise they are closed cells with unrealistic bounds
- IF( PRESENT(plon_pnt) .AND. PRESENT(plat_pnt) ) THEN
- IF( (nbondi == -1 .OR. nbondi == 2) .AND. .NOT. (jperio == 1 .OR. jperio == 4 .OR. jperio == 6) ) THEN
- DO jn = 1, 4 ! (West or jpni = 1), closed E-W
- z_bnds(jn,1,:,1) = plat_pnt(1,:) ; z_bnds(jn,1,:,2) = plon_pnt(1,:)
- END DO
- ENDIF
- IF( (nbondi == 1 .OR. nbondi == 2) .AND. .NOT. (jperio == 1 .OR. jperio == 4 .OR. jperio == 6) ) THEN
- DO jn = 1, 4 ! (East or jpni = 1), closed E-W
- z_bnds(jn,nlci,:,1) = plat_pnt(nlci,:) ; z_bnds(jn,nlci,:,2) = plon_pnt(nlci,:)
- END DO
- ENDIF
- IF( nbondj == -1 .OR. (nbondj == 2 .AND. jperio /= 2) ) THEN
- DO jn = 1, 4 ! South or (jpnj = 1, not symmetric)
- z_bnds(jn,:,1,1) = plat_pnt(:,1) ; z_bnds(jn,:,1,2) = plon_pnt(:,1)
- END DO
- ENDIF
- IF( (nbondj == 1 .OR. nbondj == 2) .AND. jperio < 3 ) THEN
- DO jn = 1, 4 ! (North or jpnj = 1), no north fold
- z_bnds(jn,:,nlcj,1) = plat_pnt(:,nlcj) ; z_bnds(jn,:,nlcj,2) = plon_pnt(:,nlcj)
- END DO
- ENDIF
- ENDIF
- ! Rotate cells at the north fold
- IF( (nbondj == 1 .OR. nbondj == 2) .AND. jperio >= 3 ) THEN
- DO jj = 1, jpj
- DO ji = 1, jpi
- IF( z_fld(ji,jj) == -1. ) THEN
- z_rot(1,:) = z_bnds(3,ji,jj,:) ; z_rot(2,:) = z_bnds(4,ji,jj,:)
- z_rot(3,:) = z_bnds(1,ji,jj,:) ; z_rot(4,:) = z_bnds(2,ji,jj,:)
- z_bnds(:,ji,jj,:) = z_rot(:,:)
- ENDIF
- END DO
- END DO
- ! Invert cells at the symmetric equator
- ELSE IF( nbondj == 2 .AND. jperio == 2 ) THEN
- DO ji = 1, jpi
- z_rot(1:2,:) = z_bnds(3:4,ji,1,:)
- z_rot(3:4,:) = z_bnds(1:2,ji,1,:)
- z_bnds(:,ji,1,:) = z_rot(:,:)
- END DO
- ENDIF
- CALL iom_set_domain_attr("grid_"//cdgrd, bounds_lat = RESHAPE(z_bnds(:,nldi:nlei,nldj:nlej,1),(/ 4,ni*nj /)), &
- bounds_lon = RESHAPE(z_bnds(:,nldi:nlei,nldj:nlej,2),(/ 4,ni*nj /)), nvertex=4 )
- DEALLOCATE( z_bnds, z_fld, z_rot )
- END SUBROUTINE set_grid_bounds
- SUBROUTINE set_grid_znl( plat )
- !!----------------------------------------------------------------------
- !! *** ROUTINE set_grid_znl ***
- !!
- !! ** Purpose : define grids for zonal mean
- !!
- !!----------------------------------------------------------------------
- REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plat
- !
- REAL(wp), DIMENSION(:), ALLOCATABLE :: zlon
- INTEGER :: ni,nj, ix, iy
-
- ni=nlei-nldi+1 ; nj=nlej-nldj+1 ! define zonal mean domain (jpj*jpk)
- ALLOCATE( zlon(ni*nj) ) ; zlon(:) = 0.
- CALL dom_ngb( 180., 90., ix, iy, 'T' ) ! i-line that passes near the North Pole : Reference latitude (used in plots)
- #if ! defined key_xios2
- CALL iom_set_domain_attr("gznl", ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-1, jbegin=njmpp+nldj-1, ni=ni, nj=nj)
- CALL iom_set_domain_attr("gznl", data_dim=2, data_ibegin = 1-nldi, data_ni = jpi, data_jbegin = 1-nldj, data_nj = jpj)
- CALL iom_set_domain_attr("gznl", lonvalue = zlon, &
- & latvalue = RESHAPE(plat(nldi:nlei, nldj:nlej),(/ ni*nj /)))
- !
- CALL iom_set_domain_attr ('ptr', zoom_ibegin=ix, zoom_nj=jpjglo)
- #else
- ! Pas teste : attention aux indices !
- CALL iom_set_domain_attr("gznl", ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-2, jbegin=njmpp+nldj-2, ni=ni, nj=nj)
- CALL iom_set_domain_attr("gznl", data_dim=2, data_ibegin = 1-nldi, data_ni = jpi, data_jbegin = 1-nldj, data_nj = jpj)
- CALL iom_set_domain_attr("gznl", lonvalue = zlon, &
- & latvalue = RESHAPE(plat(nldi:nlei, nldj:nlej),(/ ni*nj /)))
- CALL iom_set_zoom_domain_attr ("ptr", ibegin=ix-1, jbegin=0, ni=1, nj=jpjglo)
- #endif
- CALL iom_update_file_name('ptr')
- !
- END SUBROUTINE set_grid_znl
- SUBROUTINE set_grid_xios_znl( plat )
- !!----------------------------------------------------------------------
- !! *** ROUTINE set_grid_znl ***
- !!
- !! ** Purpose : define grids for zonal mean
- !!
- !!----------------------------------------------------------------------
- REAL(wp), DIMENSION(n_ni,n_nj), INTENT(in) :: plat
- !
- REAL(wp), DIMENSION(:), ALLOCATABLE :: zlon
- INTEGER :: ix, iy
-
- ALLOCATE( zlon(n_ni*n_nj) ) ; zlon(:) = 0.
- CALL dom_ngb( 180., 90., ix, iy, 'T' ) ! i-line that passes near the North Pole : Reference latitude (used in plots)
- #if defined key_xios2
- ! Pas teste : attention aux indices !
- CALL iom_set_domain_attr("gznl", ni_glo=jpiglo, nj_glo=jpjglo, ibegin=n_ibegin-1, jbegin=n_jbegin-1, ni=n_ni, nj=n_nj)
- CALL iom_set_domain_attr("gznl", data_dim=2, data_ibegin=n_data_ibegin, data_ni=n_data_ni, data_jbegin=n_data_jbegin, data_nj=n_data_nj)
- CALL iom_set_domain_attr("gznl", lonvalue = zlon, latvalue = RESHAPE( plat,(/n_ni*n_nj/) ) )
- CALL iom_set_zoom_domain_attr ("ptr", ibegin=ix-1, jbegin=0, ni=1, nj=jpjglo)
- #endif
- CALL iom_update_file_name('ptr')
- !
- END SUBROUTINE set_grid_xios_znl
- SUBROUTINE set_scalar
- !!----------------------------------------------------------------------
- !! *** ROUTINE set_scalar ***
- !!
- !! ** Purpose : define fake grids for scalar point
- !!
- !!----------------------------------------------------------------------
- REAL(wp), DIMENSION(1) :: zz = 1.
- !!----------------------------------------------------------------------
- #if ! defined key_xios2
- CALL iom_set_domain_attr('scalarpoint', ni_glo=jpnij, nj_glo=1, ibegin=narea, jbegin=1, ni=1, nj=1)
- #else
- CALL iom_set_domain_attr('scalarpoint', ni_glo=jpnij, nj_glo=1, ibegin=narea-1, jbegin=0, ni=1, nj=1)
- #endif
- CALL iom_set_domain_attr('scalarpoint', data_dim=2, data_ibegin = 1, data_ni = 1, data_jbegin = 1, data_nj = 1)
-
- zz=REAL(narea,wp)
- CALL iom_set_domain_attr('scalarpoint', lonvalue=zz, latvalue=zz)
-
- END SUBROUTINE set_scalar
- SUBROUTINE set_xmlatt
- !!----------------------------------------------------------------------
- !! *** ROUTINE set_xmlatt ***
- !!
- !! ** Purpose : automatic definitions of some of the xml attributs...
- !!
- !!----------------------------------------------------------------------
- CHARACTER(len=1),DIMENSION( 3) :: clgrd ! suffix name
- CHARACTER(len=256) :: clsuff ! suffix name
- CHARACTER(len=1) :: cl1 ! 1 character
- CHARACTER(len=2) :: cl2 ! 2 characters
- CHARACTER(len=3) :: cl3 ! 3 characters
- INTEGER :: ji, jg ! loop counters
- INTEGER :: ix, iy ! i-,j- index
- REAL(wp) ,DIMENSION(11) :: zlontao ! longitudes of tao moorings
- REAL(wp) ,DIMENSION( 7) :: zlattao ! latitudes of tao moorings
- REAL(wp) ,DIMENSION( 4) :: zlonrama ! longitudes of rama moorings
- REAL(wp) ,DIMENSION(11) :: zlatrama ! latitudes of rama moorings
- REAL(wp) ,DIMENSION( 3) :: zlonpira ! longitudes of pirata moorings
- REAL(wp) ,DIMENSION( 9) :: zlatpira ! latitudes of pirata moorings
- #if defined key_xios2
- TYPE(xios_duration) :: f_op, f_of
- #endif
-
- !!----------------------------------------------------------------------
- !
- ! frequency of the call of iom_put (attribut: freq_op)
- #if ! defined key_xios2
- WRITE(cl1,'(i1)') 1 ; CALL iom_set_field_attr('field_definition', freq_op=cl1//'ts', freq_offset='0ts')
- WRITE(cl1,'(i1)') nn_fsbc ; CALL iom_set_field_attr('SBC' , freq_op=cl1//'ts', freq_offset='0ts')
- WRITE(cl1,'(i1)') nn_fsbc ; CALL iom_set_field_attr('SBC_scalar' , freq_op=cl1//'ts', freq_offset='0ts')
- WRITE(cl1,'(i1)') nn_dttrc ; CALL iom_set_field_attr('ptrc_T' , freq_op=cl1//'ts', freq_offset='0ts')
- WRITE(cl1,'(i1)') nn_dttrc ; CALL iom_set_field_attr('diad_T' , freq_op=cl1//'ts', freq_offset='0ts')
- #else
- f_op%timestep = 1 ; f_of%timestep = 0 ; CALL iom_set_field_attr('field_definition', freq_op=f_op, freq_offset=f_of)
- f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('SBC' , freq_op=f_op, freq_offset=f_of)
- f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('SBC_scalar' , freq_op=f_op, freq_offset=f_of)
- f_op%timestep = nn_dttrc ; f_of%timestep = 0 ; CALL iom_set_field_attr('ptrc_T' , freq_op=f_op, freq_offset=f_of)
- f_op%timestep = nn_dttrc ; f_of%timestep = 0 ; CALL iom_set_field_attr('diad_T' , freq_op=f_op, freq_offset=f_of)
- #endif
-
- ! output file names (attribut: name)
- DO ji = 1, 9
- WRITE(cl1,'(i1)') ji
- CALL iom_update_file_name('file'//cl1)
- END DO
- DO ji = 1, 99
- WRITE(cl2,'(i2.2)') ji
- CALL iom_update_file_name('file'//cl2)
- END DO
- DO ji = 1, 999
- WRITE(cl3,'(i3.3)') ji
- CALL iom_update_file_name('file'//cl3)
- END DO
- ! Zooms...
- clgrd = (/ 'T', 'U', 'W' /)
- DO jg = 1, SIZE(clgrd) ! grid type
- cl1 = clgrd(jg)
- ! Equatorial section (attributs: jbegin, ni, name_suffix)
- CALL dom_ngb( 0., 0., ix, iy, cl1 )
- #if ! defined key_xios2
- CALL iom_set_domain_attr ('Eq'//cl1, zoom_jbegin=iy, zoom_ni=jpiglo)
- #else
- CALL iom_set_zoom_domain_attr ('Eq'//cl1, jbegin=iy-1, ni=jpiglo)
- #endif
- CALL iom_get_file_attr ('Eq'//cl1, name_suffix = clsuff )
- CALL iom_set_file_attr ('Eq'//cl1, name_suffix = TRIM(clsuff)//'_Eq')
- CALL iom_update_file_name('Eq'//cl1)
- END DO
- ! TAO moorings (attributs: ibegin, jbegin, name_suffix)
- zlontao = (/ 137.0, 147.0, 156.0, 165.0, -180.0, -170.0, -155.0, -140.0, -125.0, -110.0, -95.0 /)
- zlattao = (/ -8.0, -5.0, -2.0, 0.0, 2.0, 5.0, 8.0 /)
- CALL set_mooring( zlontao, zlattao )
- ! RAMA moorings (attributs: ibegin, jbegin, name_suffix)
- zlonrama = (/ 55.0, 67.0, 80.5, 90.0 /)
- zlatrama = (/ -16.0, -12.0, -8.0, -4.0, -1.5, 0.0, 1.5, 4.0, 8.0, 12.0, 15.0 /)
- CALL set_mooring( zlonrama, zlatrama )
- ! PIRATA moorings (attributs: ibegin, jbegin, name_suffix)
- zlonpira = (/ -38.0, -23.0, -10.0 /)
- zlatpira = (/ -19.0, -14.0, -8.0, 0.0, 4.0, 8.0, 12.0, 15.0, 20.0 /)
- CALL set_mooring( zlonpira, zlatpira )
-
- END SUBROUTINE set_xmlatt
- SUBROUTINE set_mooring( plon, plat)
- !!----------------------------------------------------------------------
- !! *** ROUTINE set_mooring ***
- !!
- !! ** Purpose : automatic definitions of moorings xml attributs...
- !!
- !!----------------------------------------------------------------------
- REAL(wp), DIMENSION(:), INTENT(in) :: plon, plat ! longitudes/latitudes oft the mooring
- !
- !!$ CHARACTER(len=1),DIMENSION(4) :: clgrd = (/ 'T', 'U', 'V', 'W' /) ! suffix name
- CHARACTER(len=1),DIMENSION(1) :: clgrd = (/ 'T' /) ! suffix name
- CHARACTER(len=256) :: clname ! file name
- CHARACTER(len=256) :: clsuff ! suffix name
- CHARACTER(len=1) :: cl1 ! 1 character
- CHARACTER(len=6) :: clon,clat ! name of longitude, latitude
- INTEGER :: ji, jj, jg ! loop counters
- INTEGER :: ix, iy ! i-,j- index
- REAL(wp) :: zlon, zlat
- !!----------------------------------------------------------------------
- DO jg = 1, SIZE(clgrd)
- cl1 = clgrd(jg)
- DO ji = 1, SIZE(plon)
- DO jj = 1, SIZE(plat)
- zlon = plon(ji)
- zlat = plat(jj)
- ! modifications for RAMA moorings
- IF( zlon == 67. .AND. zlat == 15. ) zlon = 65.
- IF( zlon == 90. .AND. zlat <= -4. ) zlon = 95.
- IF( zlon == 95. .AND. zlat == -4. ) zlat = -5.
- ! modifications for PIRATA moorings
- IF( zlon == -38. .AND. zlat == -19. ) zlon = -34.
- IF( zlon == -38. .AND. zlat == -14. ) zlon = -32.
- IF( zlon == -38. .AND. zlat == -8. ) zlon = -30.
- IF( zlon == -38. .AND. zlat == 0. ) zlon = -35.
- IF( zlon == -23. .AND. zlat == 20. ) zlat = 21.
- IF( zlon == -10. .AND. zlat == -14. ) zlat = -10.
- IF( zlon == -10. .AND. zlat == -8. ) zlat = -6.
- IF( zlon == -10. .AND. zlat == 4. ) THEN ; zlon = 0. ; zlat = 0. ; ENDIF
- CALL dom_ngb( zlon, zlat, ix, iy, cl1 )
- IF( zlon >= 0. ) THEN
- IF( zlon == REAL(NINT(zlon), wp) ) THEN ; WRITE(clon, '(i3, a)') NINT( zlon), 'e'
- ELSE ; WRITE(clon, '(f5.1,a)') zlon , 'e'
- ENDIF
- ELSE
- IF( zlon == REAL(NINT(zlon), wp) ) THEN ; WRITE(clon, '(i3, a)') NINT(-zlon), 'w'
- ELSE ; WRITE(clon, '(f5.1,a)') -zlon , 'w'
- ENDIF
- ENDIF
- IF( zlat >= 0. ) THEN
- IF( zlat == REAL(NINT(zlat), wp) ) THEN ; WRITE(clat, '(i2, a)') NINT( zlat), 'n'
- ELSE ; WRITE(clat, '(f4.1,a)') zlat , 'n'
- ENDIF
- ELSE
- IF( zlat == REAL(NINT(zlat), wp) ) THEN ; WRITE(clat, '(i2, a)') NINT(-zlat), 's'
- ELSE ; WRITE(clat, '(f4.1,a)') -zlat , 's'
- ENDIF
- ENDIF
- clname = TRIM(ADJUSTL(clat))//TRIM(ADJUSTL(clon))
- #if ! defined key_xios2
- CALL iom_set_domain_attr (TRIM(clname)//cl1, zoom_ibegin= ix, zoom_jbegin= iy)
- #else
- CALL iom_set_zoom_domain_attr (TRIM(clname)//cl1, ibegin= ix-1, jbegin= iy-1)
- #endif
- CALL iom_get_file_attr (TRIM(clname)//cl1, name_suffix = clsuff )
- CALL iom_set_file_attr (TRIM(clname)//cl1, name_suffix = TRIM(clsuff)//'_'//TRIM(clname))
- CALL iom_update_file_name(TRIM(clname)//cl1)
- END DO
- END DO
- END DO
-
- END SUBROUTINE set_mooring
-
- SUBROUTINE iom_update_file_name( cdid )
- !!----------------------------------------------------------------------
- !! *** ROUTINE iom_update_file_name ***
- !!
- !! ** Purpose :
- !!
- !!----------------------------------------------------------------------
- CHARACTER(LEN=*) , INTENT(in) :: cdid
- !
- CHARACTER(LEN=256) :: clname
- CHARACTER(LEN=20) :: clfreq
- CHARACTER(LEN=20) :: cldate
- INTEGER :: idx
- INTEGER :: jn
- INTEGER :: itrlen
- INTEGER :: iyear, imonth, iday, isec
- REAL(wp) :: zsec
- LOGICAL :: llexist
- #if defined key_xios2
- TYPE(xios_duration) :: output_freq
- #endif
- !!----------------------------------------------------------------------
- DO jn = 1,2
- #if ! defined key_xios2
- IF( jn == 1 ) CALL iom_get_file_attr( cdid, name = clname, output_freq = clfreq )
- #else
- output_freq = xios_duration(0,0,0,0,0,0)
- IF( jn == 1 ) CALL iom_get_file_attr( cdid, name = clname, output_freq = output_freq )
- #endif
- IF( jn == 2 ) CALL iom_get_file_attr( cdid, name_suffix = clname )
- IF ( TRIM(clname) /= '' ) THEN
- idx = INDEX(clname,'@expname@') + INDEX(clname,'@EXPNAME@')
- DO WHILE ( idx /= 0 )
- clname = clname(1:idx-1)//TRIM(cexper)//clname(idx+9:LEN_TRIM(clname))
- idx = INDEX(clname,'@expname@') + INDEX(clname,'@EXPNAME@')
- END DO
- #if ! defined key_xios2
- idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
- DO WHILE ( idx /= 0 )
- IF ( TRIM(clfreq) /= '' ) THEN
- itrlen = LEN_TRIM(clfreq)
- IF ( clfreq(itrlen-1:itrlen) == 'mo' ) clfreq = clfreq(1:itrlen-1)
- clname = clname(1:idx-1)//TRIM(clfreq)//clname(idx+6:LEN_TRIM(clname))
- ELSE
- CALL ctl_stop('error in the name of file id '//TRIM(cdid), &
- & ' attribute output_freq is undefined -> cannot replace @freq@ in '//TRIM(clname) )
- ENDIF
- idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
- END DO
- #else
- idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
- DO WHILE ( idx /= 0 )
- IF ( output_freq%timestep /= 0) THEN
- WRITE(clfreq,'(I18,A2)')INT(output_freq%timestep),'ts'
- itrlen = LEN_TRIM(ADJUSTL(clfreq))
- ELSE IF ( output_freq%hour /= 0 ) THEN
- WRITE(clfreq,'(I19,A1)')INT(output_freq%hour),'h'
- itrlen = LEN_TRIM(ADJUSTL(clfreq))
- ELSE IF ( output_freq%day /= 0 ) THEN
- WRITE(clfreq,'(I19,A1)')INT(output_freq%day),'d'
- itrlen = LEN_TRIM(ADJUSTL(clfreq))
- ELSE IF ( output_freq%month /= 0 ) THEN
- WRITE(clfreq,'(I19,A1)')INT(output_freq%month),'m'
- itrlen = LEN_TRIM(ADJUSTL(clfreq))
- ELSE IF ( output_freq%year /= 0 ) THEN
- WRITE(clfreq,'(I19,A1)')INT(output_freq%year),'y'
- itrlen = LEN_TRIM(ADJUSTL(clfreq))
- ELSE
- CALL ctl_stop('error in the name of file id '//TRIM(cdid), &
- & ' attribute output_freq is undefined -> cannot replace @freq@ in '//TRIM(clname) )
- ENDIF
- clname = clname(1:idx-1)//TRIM(ADJUSTL(clfreq))//clname(idx+6:LEN_TRIM(clname))
- idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
- END DO
- #endif
- idx = INDEX(clname,'@startdate@') + INDEX(clname,'@STARTDATE@')
- DO WHILE ( idx /= 0 )
- cldate = iom_sdate( fjulday - rdttra(1) / rday )
- clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+11:LEN_TRIM(clname))
- idx = INDEX(clname,'@startdate@') + INDEX(clname,'@STARTDATE@')
- END DO
- idx = INDEX(clname,'@startdatefull@') + INDEX(clname,'@STARTDATEFULL@')
- DO WHILE ( idx /= 0 )
- cldate = iom_sdate( fjulday - rdttra(1) / rday, ldfull = .TRUE. )
- clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+15:LEN_TRIM(clname))
- idx = INDEX(clname,'@startdatefull@') + INDEX(clname,'@STARTDATEFULL@')
- END DO
- idx = INDEX(clname,'@enddate@') + INDEX(clname,'@ENDDATE@')
- DO WHILE ( idx /= 0 )
- cldate = iom_sdate( fjulday + rdttra(1) / rday * REAL( nitend - nit000, wp ), ld24 = .TRUE. )
- clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+9:LEN_TRIM(clname))
- idx = INDEX(clname,'@enddate@') + INDEX(clname,'@ENDDATE@')
- END DO
- idx = INDEX(clname,'@enddatefull@') + INDEX(clname,'@ENDDATEFULL@')
- DO WHILE ( idx /= 0 )
- cldate = iom_sdate( fjulday + rdttra(1) / rday * REAL( nitend - nit000, wp ), ld24 = .TRUE., ldfull = .TRUE. )
- clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+13:LEN_TRIM(clname))
- idx = INDEX(clname,'@enddatefull@') + INDEX(clname,'@ENDDATEFULL@')
- END DO
- IF( jn == 1 .AND. TRIM(Agrif_CFixed()) /= '0' ) clname = TRIM(Agrif_CFixed())//"_"//TRIM(clname)
- IF( jn == 1 ) CALL iom_set_file_attr( cdid, name = clname )
- IF( jn == 2 ) CALL iom_set_file_attr( cdid, name_suffix = clname )
- ENDIF
- END DO
- END SUBROUTINE iom_update_file_name
- FUNCTION iom_sdate( pjday, ld24, ldfull )
- !!----------------------------------------------------------------------
- !! *** ROUTINE iom_sdate ***
- !!
- !! ** Purpose : send back the date corresponding to the given julian day
- !!
- !!----------------------------------------------------------------------
- REAL(wp), INTENT(in ) :: pjday ! julian day
- LOGICAL , INTENT(in ), OPTIONAL :: ld24 ! true to force 24:00 instead of 00:00
- LOGICAL , INTENT(in ), OPTIONAL :: ldfull ! true to get the compleate date: yyyymmdd_hh:mm:ss
- !
- CHARACTER(LEN=20) :: iom_sdate
- CHARACTER(LEN=50) :: clfmt ! format used to write the date
- INTEGER :: iyear, imonth, iday, ihour, iminute, isec
- REAL(wp) :: zsec
- LOGICAL :: ll24, llfull
- !
- IF( PRESENT(ld24) ) THEN ; ll24 = ld24
- ELSE ; ll24 = .FALSE.
- ENDIF
- IF( PRESENT(ldfull) ) THEN ; llfull = ldfull
- ELSE ; llfull = .FALSE.
- ENDIF
- CALL ju2ymds( pjday, iyear, imonth, iday, zsec )
- isec = NINT(zsec)
- IF ( ll24 .AND. isec == 0 ) THEN ! 00:00 of the next day -> move to 24:00 of the current day
- CALL ju2ymds( pjday - 1., iyear, imonth, iday, zsec )
- isec = 86400
- ENDIF
- IF( iyear < 10000 ) THEN ; clfmt = "i4.4,2i2.2" ! format used to write the date
- ELSE ; WRITE(clfmt, "('i',i1,',2i2.2')") INT(LOG10(REAL(iyear,wp))) + 1
- ENDIF
-
- !$AGRIF_DO_NOT_TREAT
- ! Should be fixed in the conv
- IF( llfull ) THEN
- clfmt = TRIM(clfmt)//",'_',i2.2,':',i2.2,':',i2.2"
- ihour = isec / 3600
- isec = MOD(isec, 3600)
- iminute = isec / 60
- isec = MOD(isec, 60)
- WRITE(iom_sdate, '('//TRIM(clfmt)//')') iyear, imonth, iday, ihour, iminute, isec ! date of the end of run
- ELSE
- WRITE(iom_sdate, '('//TRIM(clfmt)//')') iyear, imonth, iday ! date of the end of run
- ENDIF
- !$AGRIF_END_DO_NOT_TREAT
- END FUNCTION iom_sdate
- #else
- SUBROUTINE iom_setkt( kt, cdname )
- INTEGER , INTENT(in):: kt
- CHARACTER(LEN=*), INTENT(in) :: cdname
- IF( .FALSE. ) WRITE(numout,*) kt, cdname ! useless test to avoid compilation warnings
- END SUBROUTINE iom_setkt
- SUBROUTINE iom_context_finalize( cdname )
- CHARACTER(LEN=*), INTENT(in) :: cdname
- IF( .FALSE. ) WRITE(numout,*) cdname ! useless test to avoid compilation warnings
- END SUBROUTINE iom_context_finalize
- #endif
- LOGICAL FUNCTION iom_use( cdname )
- CHARACTER(LEN=*), INTENT(in) :: cdname
- #if defined key_iomput
- iom_use = xios_field_is_active( cdname )
- #else
- iom_use = .FALSE.
- #endif
- END FUNCTION iom_use
-
- SUBROUTINE iom_miss_val( cdname, pmiss_val )
- CHARACTER(LEN=*), INTENT(in ) :: cdname
- REAL(wp) , INTENT(out) :: pmiss_val
- #if defined key_iomput
- ! get missing value
- CALL xios_get_field_attr( cdname, default_value = pmiss_val )
- #else
- IF( .FALSE. ) WRITE(numout,*) cdname, pmiss_val ! useless test to avoid compilation warnings
- #endif
- END SUBROUTINE iom_miss_val
- ! create subroutine to retrieve voce_e3v_vsum_e1v from xios
- SUBROUTINE iom_get_v_for_btsf( cdname, z2d)
- CHARACTER(LEN=*), INTENT(in ) :: cdname
- REAL(wp), DIMENSION(jpi,jpj) :: z2d
- #if defined key_iomput
- ! get barotropic velocity
- CALL xios_recv_field( cdname, z2d)
- #else
- IF( .FALSE. ) WRITE(numout,*) cdname, z2d ! useless test to avoid compilation warnings
- #endif
- END SUBROUTINE iom_get_v_for_btsf
- ! create coordinates_xios.nc file structure strought XIOS fortran interface
- SUBROUTINE dom_xios_create_coordinates
- #if defined key_iomput
- IMPLICIT NONE
- TYPE(xios_filegroup) :: hfilegroup
- TYPE(xios_file) :: hfile
- TYPE(xios_field) :: hfield
-
- CALL xios_get_handle("file_definition", hfilegroup)
- CALL xios_add_child(hfilegroup,hfile)
- CALL xios_set_attr(hfile,name="coordinates_xios",enabled=.TRUE.,type="one_file", output_freq=xios_timestep)
- CALL xios_add_child(hfile,hfield,"dom_xios_field_T")
- CALL xios_set_attr(hfield,name="field_T", domain_ref="grid_T", operation="once")
- CALL xios_add_child(hfile,hfield,"dom_xios_field_U")
- CALL xios_set_attr(hfield,name="field_U", domain_ref="grid_U", operation="once")
- CALL xios_add_child(hfile,hfield,"dom_xios_field_V")
- CALL xios_set_attr(hfield,name="field_V", domain_ref="grid_V", operation="once")
- CALL xios_add_child(hfile,hfield,"dom_xios_field_W")
- CALL xios_set_attr(hfield,name="field_W", domain_ref="grid_W", operation="once")
- #endif
- END SUBROUTINE dom_xios_create_coordinates
- ! write coordinates_xios.nc file
- SUBROUTINE dom_xios_write_coordinates
- #if defined key_iomput
- IMPLICIT NONE
- LOGICAL,SAVE :: first=.TRUE.
-
- IF (first .AND. .NOT. using_xios_coordinates) THEN
- CALL iom_put("dom_xios_field_T",tmask(:,:,1))
- first=.FALSE.
- ENDIF
- #endif
-
- END SUBROUTINE dom_xios_write_coordinates
-
- SUBROUTINE dom_xios_read_coordinates
- #if defined key_iomput
- INTEGER :: inum ! temporary logical unit
- INTEGER :: kstart(3), kcount(3)
- LOGICAL :: file_exist
-
- INQUIRE(FILE='coordinates_xios.nc', EXIST=file_exist)
-
- IF (.NOT. file_exist) RETURN
-
- CALL iom_open( 'coordinates_xios', inum )
-
- kstart(1)=1
- kstart(2)=n_ibegin
- kstart(3)=n_jbegin
- kcount(1)=4
- kcount(2)=n_ni
- kcount(3)=n_nj
-
- CALL iom_get( inum, jpdom_unknown, 'nav_lon_grid_T', lon_grid_T, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'nav_lat_grid_T', lat_grid_T, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'area_grid_T' , area_grid_T, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'nav_lon_grid_U', lon_grid_U, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'nav_lat_grid_U', lat_grid_U, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'area_grid_U' , area_grid_U, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'nav_lon_grid_V', lon_grid_V, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'nav_lat_grid_V', lat_grid_V, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'area_grid_V' , area_grid_V, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'nav_lon_grid_W', lon_grid_W, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'nav_lat_grid_W', lat_grid_W, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'area_grid_W' , area_grid_W, kstart=kstart(2:3), kcount=kcount(2:3), lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'bounds_nav_lon_grid_T', bounds_lon_grid_T, kstart=kstart, kcount=kcount, lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'bounds_nav_lat_grid_T', bounds_lat_grid_T, kstart=kstart, kcount=kcount, lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'bounds_nav_lon_grid_U', bounds_lon_grid_U, kstart=kstart, kcount=kcount, lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'bounds_nav_lat_grid_U', bounds_lat_grid_U, kstart=kstart, kcount=kcount, lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'bounds_nav_lon_grid_V', bounds_lon_grid_V, kstart=kstart, kcount=kcount, lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'bounds_nav_lat_grid_V', bounds_lat_grid_V, kstart=kstart, kcount=kcount, lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'bounds_nav_lon_grid_W', bounds_lon_grid_W, kstart=kstart, kcount=kcount, lrowattr=ln_use_jattr )
- CALL iom_get( inum, jpdom_unknown, 'bounds_nav_lat_grid_W', bounds_lat_grid_W, kstart=kstart, kcount=kcount, lrowattr=ln_use_jattr )
- CALL iom_close( inum )
- using_xios_coordinates=.TRUE.
-
- #endif
- END SUBROUTINE dom_xios_read_coordinates
- SUBROUTINE dom_uniq_xios( puniq, cdgrd )
- !!----------------------------------------------------------------------
- !! *** ROUTINE dom_uniq ***
- !!
- !! ** Purpose : identify unique point of a grid (TUVF)
- !!
- !! ** Method : 1) aplly lbc_lnk on an array with different values for
- !each element
- !! 2) check which elements have been changed
- !!----------------------------------------------------------------------
- !
- CHARACTER(len=1) , INTENT(in ) :: cdgrd !
- REAL(wp), DIMENSION(:,:), INTENT(inout) :: puniq !
- !
- REAL(wp) :: zshift ! shift value link to the process number
- INTEGER :: ji ! dummy loop indices
- LOGICAL, DIMENSION(SIZE(puniq,1),SIZE(puniq,2),1) :: lldbl ! store whether each point is unique or not
- REAL(wp), DIMENSION(jpi,jpj) :: ztstref
- !!----------------------------------------------------------------------
- !
- ! build an array with different values for each element
- ! in mpp: make sure that these values are different even between process
- ! -> apply a shift value according to the process number
- zshift = jpi * jpj * ( narea - 1 )
- ztstref(:,:) = RESHAPE( (/ (zshift + REAL(ji,wp), ji = 1, jpi*jpj) /),(/jpi, jpj /) )
- !
- puniq(:,:) = ztstref(:,:) ! default definition
- CALL lbc_lnk( puniq, cdgrd, 1. ) ! apply boundary conditions
- lldbl(:,:,1) = puniq(:,:) == ztstref(:,:) ! check which values have been changed
- !
- puniq(:,:) = 1. ! default definition
- ! fill only the inner part of the cpu with llbl converted into real
- puniq(nldi:nlei,nldj:nlej) = REAL( COUNT( lldbl(nldi:nlei,nldj:nlej,:),dim = 3 ) , wp )
- !
- END SUBROUTINE dom_uniq_xios
- !
- SUBROUTINE dom_msk_util( pmask, cdgrd )
- !
- CHARACTER(len=1) , INTENT(in ) :: cdgrd !
- REAL(wp), DIMENSION(jpi,jpj,jpk), INTENT(inout) :: pmask !
- !
- INTEGER :: ji, jj, jk, ik ! dummy loop indices
- REAL(wp), DIMENSION(jpi,jpj) :: zuniq, zmsk
- CALL dom_uniq_xios( zuniq, cdgrd )
- !
- SELECT CASE ( cdgrd )
- CASE('T')
- DO jj = 1, jpj
- DO ji = 1, jpi
- ik = mikt(ji,jj)
- zmsk(ji,jj) = tmask(ji,jj,ik) * zuniq(ji,jj)
- END DO
- END DO
- CASE('U')
- DO jj = 1, jpj
- DO ji = 1, jpi
- ik = miku(ji,jj)
- zmsk(ji,jj) = umask(ji,jj,ik) * zuniq(ji,jj)
- END DO
- END DO
- CASE('V')
- DO jj = 1, jpj
- DO ji = 1, jpi
- ik = mikv(ji,jj)
- zmsk(ji,jj) = vmask(ji,jj,ik) * zuniq(ji,jj)
- END DO
- END DO
- CASE('W')
- DO jj = 1, jpj
- DO ji = 1, jpi
- ik = mikt(ji,jj)
- zmsk(ji,jj) = wmask(ji,jj,ik) * zuniq(ji,jj)
- END DO
- END DO
- END SELECT
- !
- DO jk = 1, jpkm1
- pmask(:,:,jk) = pmask(:,:,jk) * zmsk(:,:)
- END DO
- !
- END SUBROUTINE dom_msk_util
-
-
- !!======================================================================
- END MODULE iom
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