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- easyblock = 'PythonBundle'
- name = 'ELIC_Python'
- version = '1'
- versionsuffix = '-Python-%(pyver)s'
- homepage = 'https://gogs.elic.ucl.ac.be'
- description = """This repo provides additional Python and R extensions for ELIC ecosystem."""
- toolchain = {'name': 'intel', 'version': '2020b'}
- builddependencies = [
- ('pkg-config', '0.29.2'),
- ]
- dependencies = [
- ('Python', '3.8.6'),
- ('SciPy-bundle', '2020.11'),
- ('matplotlib', '3.3.3', versionsuffix),
- ('GDAL', '3.2.0', versionsuffix),
- ('NCL', '6.6.2'),
- ('CDO', '1.9.9'),
- ('NCO', '4.9.5'),
- ('ncview', '2.1.7'),
- ('libmo_unpack', '3.1.2'),
- ('orca', '3.4.3'),
- ]
- exts_defaultclass = 'PythonPackage'
- exts_default_options = {
- 'source_tmpl': '%(name)s-%(version)s.tar.gz',
- }
- exts_list = [
- # Python deps, order is important!
- ('pip', '20.2.4', {
- 'modulename': 'pip',
- 'source_tmpl': '%(version)s.tar.gz',
- 'source_urls': ['https://github.com/pypa/pip/archive/'],
- }),
- ('PyKE', '1.1.1', {
- 'modulename': 'pyke',
- 'source_tmpl': 'pyke3-%(version)s.zip',
- 'source_urls': ['https://sourceforge.net/projects/%(name)s/files/%(name)s/%(version)s'],
- 'use_pip': True,
- }),
- #('stratify', '0.1.1', {
- # 'modulename': 'stratify',
- # 'source_tmpl': 'v%(version)s.tar.gz',
- # 'source_urls': ['https://github.com/SciTools-incubator/python-stratify/archive/'],
- #}),
- #('mo_pack', '0.2.0', {
- # 'source_tmpl': 'v%(version)s.tar.gz',
- # 'source_urls': ['https://github.com/SciTools/mo_pack/archive/'],
- # 'checksums': ['4aa70e1f846b666670843bc2514435dedf7393203e88abaf74d48f8f2717a726'],
- #}),
- ('basemap', '1.2.1rel', {
- 'modulename': 'mpl_toolkits',
- 'source_tmpl': 'v%(version)s.tar.gz',
- 'source_urls': ['https://github.com/matplotlib/basemap/archive'],
- 'use_pip': True,
- }),
- ]
- modextrapaths = {
- 'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
- 'PYTHONUSERBASE': '',
- }
- postinstallcmds = [
- "cd %(installdir)s && " +
- 'pip install setuptools --upgrade && ' +
- 'pip install olefile pyproj pyshp chardet urllib3 --prefix="%(installdir)s" && ' +
- 'pip install OWSLib ' +
- 'netCDF4 ' +
- 'dask ' +
- 'cf-units ' +
- 'Cartopy ' +
- #'Shapely ' +
- #'astropy ' +
- #'tqdm ' +
- #'cf-units ' +
- #'cftime ' +
- #'singledispatch ' +
- #'backports_abc ' +
- #'tornado ' +
- #'toolz ' +
- #'patsy ' +
- #'statsmodels ' +
- #'nc-time-axis ' +
- #'yamale ' +
- #'affine ' +
- #'boto3 ' +
- #'botocore ' +
- #'click-plugins ' +
- #'cligj ' +
- #'cloudpickle ' +
- #'fiona ' +
- #'geopandas ' +
- #'jmespath ' +
- #'munch ' +
- #'networkx ' +
- #'python-utils ' +
- #'rasterio ' +
- #'s3transfer ' +
- #'snuggs ' +
- #'xarray ' +
- #'PyWavelets ' +
- #'progressbar2 ' +
- #'scikit-image ' +
- #'descartes ' +
- #'graphviz ' +
- #'Bottleneck ' +
- #'pickleshare ' +
- #'prompt_toolkit ' +
- #'ptyprocess ' +
- #'pexpect ' +
- #'typelib ' +
- #'testpath ' +
- #'parso ' +
- #'jedi ' +
- #'scikit-learn ' +
- #'ldap3 ' +
- #'skills ' +
- #'XlsxWriter ' +
- #'pyrsistent ' +
- #'jsonschema ' +
- #'plotly-charts ' +
- #'rpy2 ' +
- '--prefix="%(installdir)s" '
- ]
- moduleclass = 'numlib'
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