easyblock = 'PythonBundle' name = 'ELIC_Python' version = '1' versionsuffix = '-Python-%(pyver)s' homepage = 'https://gogs.elic.ucl.ac.be' description = """This repo provides additional Python and R extensions for ELIC ecosystem.""" toolchain = {'name': 'intel', 'version': '2016a'} dependencies = [ ('Python', '2.7.11'), ('matplotlib', '1.5.1', versionsuffix), ('GEOS', '3.5.0', versionsuffix), ('GDAL', '2.0.2'), #('NCL', '6.6.2'), ('CDO', '1.7.2'), #('NCO', '4.9.5'), #('ncview', '2.1.7'), #('libmo_unpack', '3.1.2'), #('orca', '3.4.3'), ] exts_defaultclass = 'PythonPackage' exts_default_options = { 'source_tmpl': '%(name)s-%(version)s.tar.gz', } exts_list = [ # Python deps, order is important! ('pip', '9.0.1', { 'modulename': 'pip', 'source_tmpl': '%(version)s.tar.gz', 'source_urls': ['https://github.com/pypa/pip/archive/'], }), ('PyKE', '1.1.1', { 'modulename': 'pyke', 'source_tmpl': 'pyke3-%(version)s.zip', 'source_urls': ['https://sourceforge.net/projects/%(name)s/files/%(name)s/%(version)s'], 'use_pip': True, }), ('basemap', '1.2.1rel', { 'modulename': 'mpl_toolkits', 'source_tmpl': 'v%(version)s.tar.gz', 'source_urls': ['https://github.com/matplotlib/basemap/archive'], 'use_pip': True, }), ] modextrapaths = { 'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages', 'PYTHONUSERBASE': '', } postinstallcmds = [ "cd %(installdir)s " ] #pip install olefile pyproj pyshp chardet urllib3 --user #pip install OWSLib eofs dask cf-units Cartopy netCDF4 mpi4py GitPython keyring --user #pip install certifi requests OWSLib netCDF4 geoval Shapely dask astropy oktopus bs4 tqdm cf-units cftime pyugrid cycler singledispatch backports_abc tornado toolz patsy statsmodels nc-time-axis yamale psutil bcrypt cffi cryptography Cython decorator mpi4py numpy pandas pbr pycparser scipy six virtualenv xlrd affine atomicwrites boto3 botocore click click-plugins cligj cloudpickle configobj docutils fiona geopandas jmespath more-itertools motionless munch networkx pathlib2 pluggy py pytest python-utils rasterio s3transfer scandir snuggs xarray py-expression-eval PyWavelets attrs progressbar2 scikit-image PyNaCl descartes graphviz wcwidth Bottleneck pickleshare simplegeneric prompt_toolkit Pygments ptyprocess pexpect typelib testpath parso jedi backcall scikit-learn ldap3 skills XlsxWriter retrying pyrsistent jsonschema plotly-charts --user #pip install SkillMetrics cdo PyQt5 --user moduleclass = 'numlib'