easyblock = 'PythonBundle' name = 'ELIC_Python' version = '1' versionsuffix = '-Python-%(pyver)s' homepage = 'https://gogs.elic.ucl.ac.be' description = """This repo provides additional Python and R extensions for ELIC ecosystem.""" toolchain = {'name': 'foss', 'version': '2020b'} builddependencies = [ ('pkg-config', '0.29.2'), ] dependencies = [ ('Python', '3.8.6'), ('SciPy-bundle', '2020.11'), ('matplotlib', '3.3.3', versionsuffix), ('GDAL', '3.2.0', versionsuffix), #('NCL', '6.6.2'), ('CDO', '1.9.9'), ('NCO', '4.9.5'), ('ncview', '2.1.7'), ('libmo_unpack', '3.1.2'), ('orca', '3.4.3'), ] exts_defaultclass = 'PythonPackage' exts_default_options = { 'source_tmpl': '%(name)s-%(version)s.tar.gz', } exts_list = [ # Python deps, order is important! ('pip', '20.2.4', { 'modulename': 'pip', 'source_tmpl': '%(version)s.tar.gz', 'source_urls': ['https://github.com/pypa/pip/archive/'], }), ('PyKE', '1.1.1', { 'modulename': 'pyke', 'source_tmpl': 'pyke3-%(version)s.zip', 'source_urls': ['https://sourceforge.net/projects/%(name)s/files/%(name)s/%(version)s'], 'use_pip': True, }), ('stratify', '0.1.1', { 'modulename': 'stratify', 'source_tmpl': 'v%(version)s.tar.gz', 'source_urls': ['https://github.com/SciTools-incubator/python-stratify/archive/'], }), #('mo_pack', '0.2.0', { # 'source_tmpl': 'v%(version)s.tar.gz', # 'source_urls': ['https://github.com/SciTools/mo_pack/archive/'], # 'checksums': ['4aa70e1f846b666670843bc2514435dedf7393203e88abaf74d48f8f2717a726'], #}), #('basemap', '1.2.1rel', { # 'modulename': 'mpl_toolkits', # 'source_tmpl': 'v%(version)s.tar.gz', # 'source_urls': ['https://github.com/matplotlib/basemap/archive'], # 'use_pip': True, #}), ] modextrapaths = { 'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages', 'PYTHONUSERBASE': '', } postinstallcmds = [ "cd %(installdir)s && " + 'pip install setuptools --upgrade && ' + 'pip install olefile pyproj pyshp chardet urllib3 --install-option "--prefix=%(installdir)s" && ' + 'pip install OWSLib ' + 'netCDF4 ' + 'dask ' + 'cf-units ' + 'Cartopy ' + #'Shapely ' + #'astropy ' + #'tqdm ' + #'cf-units ' + #'cftime ' + #'singledispatch ' + #'backports_abc ' + #'tornado ' + #'toolz ' + #'patsy ' + #'statsmodels ' + #'nc-time-axis ' + #'yamale ' + #'affine ' + #'boto3 ' + #'botocore ' + #'click-plugins ' + #'cligj ' + #'cloudpickle ' + #'fiona ' + #'geopandas ' + #'jmespath ' + #'munch ' + #'networkx ' + #'python-utils ' + #'rasterio ' + #'s3transfer ' + #'snuggs ' + #'xarray ' + #'PyWavelets ' + #'progressbar2 ' + #'scikit-image ' + #'descartes ' + #'graphviz ' + #'Bottleneck ' + #'pickleshare ' + #'prompt_toolkit ' + #'ptyprocess ' + #'pexpect ' + #'typelib ' + #'testpath ' + #'parso ' + #'jedi ' + #'scikit-learn ' + #'ldap3 ' + #'skills ' + #'XlsxWriter ' + #'pyrsistent ' + #'jsonschema ' + #'plotly-charts ' + #'rpy2 ' + '--install-option "--prefix=%(installdir)s" ' ] moduleclass = 'numlib'