ESMValTools 2019b

foss-2019b/ELIC_Python-1-foss-2019b-Python-3.7.4.eb

@@ -72,8 +72,10 @@ postinstallcmds = [
     'pip install olefile Pillow pyproj pyshp chardet urllib3 --install-option "--prefix=%(installdir)s" && ' +
     'pip install OWSLib ' +
                 'netCDF4 ' +
+                'dask ' +
+                'cf-units ' +
+                'Cartopy ' +
                 #'Shapely ' +
-                #'dask ' +
                 #'astropy ' +
                 #'tqdm ' +
                 #'cf-units ' +

foss-2019b/ESMValTool-2.0.0b4-foss-2019b-Python-3.7.4.eb

@@ -0,0 +1,92 @@
+easyblock = 'Binary'
+
+name = 'ESMValTool'
+version = '2.0.0b4'
+versionsuffix = '-Python-%(pyver)s'
+
+homepage = 'https://www.esmvaltool.org/'
+description = """The Earth System Model eValuation Tool (ESMValTool)
+ is a community diagnostics and performance metrics tool
+ for the evaluation of Earth System Models (ESMs) that
+ allows for routine comparison of single or multiple models,
+ either against predecessor versions or against observations."""
+
+toolchain = {'name': 'foss', 'version': '2019b'}
+toolchainopts = {'pic': True}
+
+source_urls = ['https://github.com/ESMValGroup/ESMValTool/archive/']
+sources = [{'filename': SOURCE_TAR_GZ, 'download_filename': 'v%(version)s.tar.gz'}]
+
+dependencies = [
+    ('Python', '3.7.4'),
+    ('ELIC_Python', '1', versionsuffix), 
+]
+
+exts_defaultclass = 'PythonPackage'
+exts_default_options = {
+    'source_tmpl': '%(name)s-%(version)s.tar.gz',
+}
+
+exts_list = [
+    # Python deps, order is important!
+    ('xarray', '0.15.1', {
+        'source_urls': ['https://pypi.python.org/packages/source/x/xarray/'],
+    }),
+    ('eofs', '1.4.0', {
+        'source_urls': ['https://pypi.python.org/packages/source/e/eofs/'],
+    }),
+    ('scitools-iris', '2.4.0', {
+        'modulename': 'iris',
+        'source_tmpl': 'v%(version)s.tar.gz',
+        'source_urls': ['https://github.com/SciTools/iris/archive/'],
+    }),
+    ('iris-grib', '0.15.1', {
+        'modulename': 'iris_grib',
+        'source_tmpl': 'v%(version)s.tar.gz',
+        'source_urls': ['https://github.com/SciTools/iris-grib/archive/'],
+    }),
+    ('ESMValCore', '2.0.0b9', {
+        'modulename': 'esmvalcore',
+        'source_tmpl': 'v%(version)s.tar.gz',
+        'source_urls': ['https://github.com/ESMValGroup/ESMValCore/archive/'],
+    }),
+]
+
+skipsteps = ['sanitycheck']
+
+modextrapaths = {
+    'PYTHONPATH': 'lib/python%(pyshortver)s/site-packages',
+}
+
+postinstallcmds = [
+    "cd %(installdir)s && " +
+    "cp ../../../sources/e/ESMValTool/extensions/v2.0.0b9.tar.gz . && " +
+    "cp ../../../sources/e/ESMF/esmf_8_0_0_src.tar.gz . && " +
+    "tar xzf v2.0.0b9.tar.gz && " +
+    "tar xzf ESMValTool-%(version)s.tar.gz && " +
+    "tar xzf esmf_8_0_0_src.tar.gz && " +
+    "cd ESMValTool-%(version)s && " +
+    'PYTHONPATH="%(installdir)s/lib/python%(pyshortver)s/site-packages":"${PYTHONPATH}" && python setup.py install --prefix=%(installdir)s && ' +
+    "cd esmvaltool  && " +
+    "cp -r cmorizers diag_scripts interface_scripts recipes utils %(installdir)s/lib/python%(pyshortver)s/site-packages/ESMValTool-%(version)s-py3.7.egg/esmvaltool && " +
+    "cp config-references.yml %(installdir)s/lib/python%(pyshortver)s/site-packages/ESMValTool-%(version)s-py3.7.egg/esmvaltool && " +
+    "cd %(installdir)s/ESMValCore-2.0.0b9/esmvalcore && " +
+    "cp -r cmor utils preprocessor %(installdir)s/lib/python3.7/site-packages/ESMValCore-2.0.0b9-py3.7.egg/esmvalcore && " +
+    "cp config-developer.yml %(installdir)s/lib/python3.7/site-packages/ESMValCore-2.0.0b9-py3.7.egg/esmvalcore && " +
+    "cp config-logging.yml %(installdir)s/lib/python3.7/site-packages/ESMValCore-2.0.0b9-py3.7.egg/esmvalcore && " +
+    "cp config-user.yml %(installdir)s/lib/python3.7/site-packages/ESMValCore-2.0.0b9-py3.7.egg/esmvalcore && " +
+    "cd %(installdir)s/esmf/src/addon/ESMPy && " +
+    "python setup.py build --ESMFMKFILE=%(installdir)s/../../ESMF/8.0.0-foss-2019b/lib/esmf.mk && " +
+    "python setup.py install --prefix=%(installdir)s && " +
+    "cd %(installdir)s && " +
+    'pip install xesmf xgcm --install-option "--prefix=%(installdir)s" && ' +
+    "rm -rf ESMValTool-%(version)s ESMValCore-2.0.0b9 v2.0.0b9.tar.gz esmf esmf_8_0_0_src.tar.gz"
+]
+
+#modloadmsg = (
+#    "Now call 'esmvaltool -h'\n\n"
+#    "To install ESMValTool in your own directory execute: \n"
+#    "tar zxf $EBROOTESMVALTOOL/ESMValTool-%(version)s.tar.gz\n"
+#)
+
+moduleclass = 'geo'