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- + set -o nounset
- + set -o errexit
- + yearb=1983
- + yeare=1983
- + grid=eORCA1
- + nbsmooth=2
- + sosiedir=/gpfs/home/acad/ucl-elic/adelhass/tools/sosie-master/bin
- + mask=/gpfs/home/acad/ucl-elic/adelhass/git/EnKF/conversion_uf/mask-eORCA1.nc
- + sourcedir=/gpfs/home/acad/ucl-elic/adelhass/git/EnKF/conversion_uf/OSI-SAF-450
- + ioutdir=/gpfs/home/acad/ucl-elic/adelhass/git/EnKF/conversion_uf/OSI-SAF-450-on-nemo
- + scratchdir=/gpfs/home/acad/ucl-elic/adelhass/scratch_limhr/sosie
- + weightdir=
- + tmpdir=/gpfs/home/acad/ucl-elic/adelhass/scratch_limhr/sosie/TMP_1731
- + echo 'TMPDIR IS >>>>>> /gpfs/home/acad/ucl-elic/adelhass/scratch_limhr/sosie/TMP_1731 <<<<<<<'
- + mkdir -p /gpfs/home/acad/ucl-elic/adelhass/scratch_limhr/sosie/TMP_1731
- + cp namelist_OSISAF-conc namelist_OSISAF-error namelist_OSISAF-mask /gpfs/home/acad/ucl-elic/adelhass/scratch_limhr/sosie/TMP_1731
- + [[ -f /sosie_mapping_OSISAF-nh-eORCA1.nc ]]
- + [[ -f /sosie_mapping_OSISAF-sh-eORCA1.nc ]]
- + cd /gpfs/home/acad/ucl-elic/adelhass/scratch_limhr/sosie/TMP_1731
- + '[' '!' -f /gpfs/home/acad/ucl-elic/adelhass/git/EnKF/conversion_uf/mask-eORCA1.nc ']'
- + ln -sf /gpfs/home/acad/ucl-elic/adelhass/git/EnKF/conversion_uf/mask-eORCA1.nc mask_out.nc
- + ln -sf /gpfs/home/acad/ucl-elic/adelhass/tools/sosie-master/bin/sosie3.x .
- ++ seq 1983 1983
- + for year in `seq ${yearb} ${yeare}`
- + echo 1983
- + rm -f listfiles.txt
- + ls /gpfs/home/acad/ucl-elic/adelhass/git/EnKF/conversion_uf/OSI-SAF-450/ice_conc_nh_ease2-250_cdr-v2p0_198312311200.nc
- ++ cat list_files.txt
- + for file in `cat list_files.txt`
- ++ sed -e s/ice_conc_nh_ease2-250_cdr-v2p0_// -e s/1200.nc//
- ++ basename /gpfs/home/acad/ucl-elic/adelhass/git/EnKF/conversion_uf/OSI-SAF-450/ice_conc_nh_ease2-250_cdr-v2p0_198312311200.nc
- + tag=19831231
- + echo 19831231
- ++ wc -l
- ++ ls /gpfs/home/acad/ucl-elic/adelhass/git/EnKF/conversion_uf/OSI-SAF-450/ice_conc_nh_ease2-250_cdr-v2p0_198312311200.nc /gpfs/home/acad/ucl-elic/adelhass/git/EnKF/conversion_uf/OSI-SAF-450/ice_conc_sh_ease2-250_cdr-v2p0_198312311200.nc
- + nfile=2
- + [[ 2 == 2 ]]
- + echo 'Two files were found for the time stamp 19831231!'
- + for hemi in nh sh
- + filein=/gpfs/home/acad/ucl-elic/adelhass/git/EnKF/conversion_uf/OSI-SAF-450/ice_conc_nh_ease2-250_cdr-v2p0_198312311200.nc
- + cp -f /gpfs/home/acad/ucl-elic/adelhass/git/EnKF/conversion_uf/OSI-SAF-450/ice_conc_nh_ease2-250_cdr-v2p0_198312311200.nc data_in_nh-19831231.nc
- + cdo chname,status_flag,mask -eqc,0 -selvar,status_flag data_in_nh-19831231.nc mask_in_nh-19831231.nc
- + [[ 2 == 0 ]]
- + mv data_in_nh-19831231.nc data_in_smooth0_nh-19831231.nc
- ++ seq 1 2
- + for jsmooth in `seq 1 $nbsmooth`
- + cdo smooth9 data_in_smooth0_nh-19831231.nc data_in_smooth1_nh-19831231.nc
- + for jsmooth in `seq 1 $nbsmooth`
- + cdo smooth9 data_in_smooth1_nh-19831231.nc data_in_smooth2_nh-19831231.nc
- + mv data_in_smooth2_nh-19831231.nc data_in_smooth_nh-19831231.nc
- + sed -e s/TTAARRGGEETT/eORCA1/ -e s/HHEEMMII/nh/ -e s/TTAAGG/19831231/ namelist_OSISAF-mask
- + sed -e s/TTAARRGGEETT/eORCA1/ -e s/HHEEMMII/nh/ -e s/TTAAGG/19831231/ namelist_OSISAF-conc
- + ./sosie3.x
- At line 109 of file src/mod_init.f90 (unit = 13, file = 'namelist')
- Fortran runtime error: namelist not terminated with / or &end
- Error termination. Backtrace:
- #0 0x7f652b36e74d in finalize_transfer
- at ../../../libgfortran/io/transfer.c:4305
- #1 0x45043d in __mod_init_MOD_read_nmlst
- at src/mod_init.f90:109
- #2 0x4039b9 in sosie
- at src/sosie.f90:75
- #3 0x408cfc in main
- at src/sosie.f90:40
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